Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27■■□□□ 1.91
VPS52Q8N1B4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
VPS52Q8N1B4 TSPY13P-201ENST00000338964 914 ntBASIC26.99■■□□□ 1.91
VPS52Q8N1B4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.99■■□□□ 1.91
VPS52Q8N1B4 AP004833.2-201ENST00000532228 1454 ntBASIC26.99■■□□□ 1.91
VPS52Q8N1B4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.98■■□□□ 1.91
VPS52Q8N1B4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.98■■□□□ 1.91
VPS52Q8N1B4 AC004987.1-201ENST00000428627 508 ntBASIC26.98■■□□□ 1.91
VPS52Q8N1B4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
VPS52Q8N1B4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
VPS52Q8N1B4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
VPS52Q8N1B4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.97■■□□□ 1.91
VPS52Q8N1B4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.96■■□□□ 1.91
VPS52Q8N1B4 ATP5G2P3-201ENST00000429083 425 ntBASIC26.96■■□□□ 1.91
VPS52Q8N1B4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.96■■□□□ 1.91
VPS52Q8N1B4 AL157400.5-201ENST00000507624 621 ntBASIC26.96■■□□□ 1.91
VPS52Q8N1B4 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.96■■□□□ 1.91
VPS52Q8N1B4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
VPS52Q8N1B4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
VPS52Q8N1B4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.96■■□□□ 1.91
VPS52Q8N1B4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
VPS52Q8N1B4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
VPS52Q8N1B4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.95■■□□□ 1.9
VPS52Q8N1B4 AC100797.4-201ENST00000631653 1827 ntBASIC26.95■■□□□ 1.9
VPS52Q8N1B4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.94■■□□□ 1.9
VPS52Q8N1B4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
VPS52Q8N1B4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
VPS52Q8N1B4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS52Q8N1B4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
VPS52Q8N1B4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
VPS52Q8N1B4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
VPS52Q8N1B4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
VPS52Q8N1B4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
VPS52Q8N1B4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.91■■□□□ 1.9
VPS52Q8N1B4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.9■■□□□ 1.9
VPS52Q8N1B4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS52Q8N1B4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS52Q8N1B4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS52Q8N1B4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS52Q8N1B4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.89■■□□□ 1.9
VPS52Q8N1B4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
VPS52Q8N1B4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
VPS52Q8N1B4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
VPS52Q8N1B4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
VPS52Q8N1B4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.89■■□□□ 1.9
VPS52Q8N1B4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.89■■□□□ 1.9
VPS52Q8N1B4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
VPS52Q8N1B4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.88■■□□□ 1.89
VPS52Q8N1B4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
VPS52Q8N1B4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.88■■□□□ 1.89
VPS52Q8N1B4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
VPS52Q8N1B4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.88■■□□□ 1.89
VPS52Q8N1B4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
VPS52Q8N1B4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
VPS52Q8N1B4 AC007029.1-201ENST00000604183 313 ntBASIC26.87■■□□□ 1.89
VPS52Q8N1B4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.87■■□□□ 1.89
VPS52Q8N1B4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
VPS52Q8N1B4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS52Q8N1B4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS52Q8N1B4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
VPS52Q8N1B4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.86■■□□□ 1.89
VPS52Q8N1B4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.86■■□□□ 1.89
VPS52Q8N1B4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS52Q8N1B4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS52Q8N1B4 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.86■■□□□ 1.89
VPS52Q8N1B4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.86■■□□□ 1.89
VPS52Q8N1B4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.85■■□□□ 1.89
VPS52Q8N1B4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
VPS52Q8N1B4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
VPS52Q8N1B4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
VPS52Q8N1B4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
VPS52Q8N1B4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.85■■□□□ 1.89
VPS52Q8N1B4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
VPS52Q8N1B4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.84■■□□□ 1.89
VPS52Q8N1B4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
VPS52Q8N1B4 AL359258.2-201ENST00000564063 1566 ntBASIC26.84■■□□□ 1.89
VPS52Q8N1B4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.84■■□□□ 1.89
VPS52Q8N1B4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.83■■□□□ 1.89
VPS52Q8N1B4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS52Q8N1B4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.83■■□□□ 1.88
VPS52Q8N1B4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.83■■□□□ 1.88
VPS52Q8N1B4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.83■■□□□ 1.88
VPS52Q8N1B4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
VPS52Q8N1B4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.81■■□□□ 1.88
VPS52Q8N1B4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS52Q8N1B4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS52Q8N1B4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.8■■□□□ 1.88
VPS52Q8N1B4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS52Q8N1B4 AC133552.2-201ENST00000619106 1032 ntBASIC26.8■■□□□ 1.88
VPS52Q8N1B4 AC129492.7-201ENST00000622992 756 ntBASIC26.8■■□□□ 1.88
VPS52Q8N1B4 SMPD5-203ENST00000639008 1464 ntBASIC26.8■■□□□ 1.88
VPS52Q8N1B4 AC009831.1-201ENST00000580420 1582 ntBASIC26.8■■□□□ 1.88
VPS52Q8N1B4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
VPS52Q8N1B4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
VPS52Q8N1B4 RARRES2P1-201ENST00000474487 481 ntBASIC26.78■■□□□ 1.88
VPS52Q8N1B4 AL592293.1-201ENST00000502889 1188 ntBASIC26.78■■□□□ 1.88
VPS52Q8N1B4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
VPS52Q8N1B4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
VPS52Q8N1B4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
VPS52Q8N1B4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms