Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.47■■□□□ 1.67
CHPFQ8IZ52 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CHPFQ8IZ52 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CHPFQ8IZ52 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.46■■□□□ 1.67
CHPFQ8IZ52 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHPFQ8IZ52 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.46■■□□□ 1.67
CHPFQ8IZ52 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CHPFQ8IZ52 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.45■■□□□ 1.66
CHPFQ8IZ52 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CHPFQ8IZ52 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
CHPFQ8IZ52 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHPFQ8IZ52 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
CHPFQ8IZ52 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHPFQ8IZ52 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CHPFQ8IZ52 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.45■■□□□ 1.66
CHPFQ8IZ52 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.45■■□□□ 1.66
CHPFQ8IZ52 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHPFQ8IZ52 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CHPFQ8IZ52 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.44■■□□□ 1.66
CHPFQ8IZ52 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHPFQ8IZ52 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHPFQ8IZ52 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
CHPFQ8IZ52 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHPFQ8IZ52 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHPFQ8IZ52 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHPFQ8IZ52 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHPFQ8IZ52 AC007029.1-201ENST00000604183 313 ntBASIC25.43■■□□□ 1.66
CHPFQ8IZ52 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHPFQ8IZ52 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHPFQ8IZ52 TSPY13P-201ENST00000338964 914 ntBASIC25.42■■□□□ 1.66
CHPFQ8IZ52 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CHPFQ8IZ52 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.42■■□□□ 1.66
CHPFQ8IZ52 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHPFQ8IZ52 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHPFQ8IZ52 AC004987.1-201ENST00000428627 508 ntBASIC25.41■■□□□ 1.66
CHPFQ8IZ52 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.41■■□□□ 1.66
CHPFQ8IZ52 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHPFQ8IZ52 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHPFQ8IZ52 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHPFQ8IZ52 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHPFQ8IZ52 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.4■■□□□ 1.66
CHPFQ8IZ52 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.4■■□□□ 1.66
CHPFQ8IZ52 ATP5G2P3-201ENST00000429083 425 ntBASIC25.4■■□□□ 1.66
CHPFQ8IZ52 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.4■■□□□ 1.66
CHPFQ8IZ52 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHPFQ8IZ52 SMPD5-203ENST00000639008 1464 ntBASIC25.4■■□□□ 1.66
CHPFQ8IZ52 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.39■■□□□ 1.66
CHPFQ8IZ52 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.39■■□□□ 1.66
CHPFQ8IZ52 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHPFQ8IZ52 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHPFQ8IZ52 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CHPFQ8IZ52 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.39■■□□□ 1.66
CHPFQ8IZ52 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.39■■□□□ 1.66
CHPFQ8IZ52 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CHPFQ8IZ52 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.38■■□□□ 1.65
CHPFQ8IZ52 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHPFQ8IZ52 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CHPFQ8IZ52 AP002414.2-202ENST00000590929 1450 ntBASIC25.38■■□□□ 1.65
CHPFQ8IZ52 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHPFQ8IZ52 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.36■■□□□ 1.65
CHPFQ8IZ52 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHPFQ8IZ52 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHPFQ8IZ52 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.36■■□□□ 1.65
CHPFQ8IZ52 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHPFQ8IZ52 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.36■■□□□ 1.65
CHPFQ8IZ52 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CHPFQ8IZ52 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.36■■□□□ 1.65
CHPFQ8IZ52 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHPFQ8IZ52 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
CHPFQ8IZ52 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
CHPFQ8IZ52 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHPFQ8IZ52 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHPFQ8IZ52 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.35■■□□□ 1.65
CHPFQ8IZ52 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHPFQ8IZ52 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHPFQ8IZ52 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHPFQ8IZ52 AC133552.2-201ENST00000619106 1032 ntBASIC25.34■■□□□ 1.65
CHPFQ8IZ52 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHPFQ8IZ52 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHPFQ8IZ52 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.33■■□□□ 1.65
CHPFQ8IZ52 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHPFQ8IZ52 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHPFQ8IZ52 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
CHPFQ8IZ52 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHPFQ8IZ52 AC009831.1-201ENST00000580420 1582 ntBASIC25.32■■□□□ 1.64
CHPFQ8IZ52 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHPFQ8IZ52 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.32■■□□□ 1.64
CHPFQ8IZ52 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.31■■□□□ 1.64
CHPFQ8IZ52 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHPFQ8IZ52 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CHPFQ8IZ52 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHPFQ8IZ52 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHPFQ8IZ52 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHPFQ8IZ52 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHPFQ8IZ52 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.31■■□□□ 1.64
CHPFQ8IZ52 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHPFQ8IZ52 AL592293.1-201ENST00000502889 1188 ntBASIC25.3■■□□□ 1.64
CHPFQ8IZ52 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHPFQ8IZ52 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHPFQ8IZ52 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms