Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
DDX60Q8IY21 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
DDX60Q8IY21 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.32■■■□□ 2.6
DDX60Q8IY21 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
DDX60Q8IY21 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
DDX60Q8IY21 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
DDX60Q8IY21 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.32■■■□□ 2.6
DDX60Q8IY21 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
DDX60Q8IY21 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.31■■■□□ 2.6
DDX60Q8IY21 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.31■■■□□ 2.6
DDX60Q8IY21 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
DDX60Q8IY21 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
DDX60Q8IY21 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
DDX60Q8IY21 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
DDX60Q8IY21 AC004987.1-201ENST00000428627 508 ntBASIC31.29■■■□□ 2.6
DDX60Q8IY21 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.29■■■□□ 2.6
DDX60Q8IY21 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.29■■■□□ 2.6
DDX60Q8IY21 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.29■■■□□ 2.6
DDX60Q8IY21 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
DDX60Q8IY21 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
DDX60Q8IY21 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
DDX60Q8IY21 AL592293.1-201ENST00000502889 1188 ntBASIC31.29■■■□□ 2.6
DDX60Q8IY21 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.29■■■□□ 2.6
DDX60Q8IY21 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.29■■■□□ 2.6
DDX60Q8IY21 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.28■■■□□ 2.6
DDX60Q8IY21 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
DDX60Q8IY21 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
DDX60Q8IY21 TSPY13P-201ENST00000338964 914 ntBASIC31.28■■■□□ 2.6
DDX60Q8IY21 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
DDX60Q8IY21 AC009831.1-201ENST00000580420 1582 ntBASIC31.28■■■□□ 2.6
DDX60Q8IY21 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
DDX60Q8IY21 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
DDX60Q8IY21 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.27■■■□□ 2.6
DDX60Q8IY21 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
DDX60Q8IY21 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
DDX60Q8IY21 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.27■■■□□ 2.6
DDX60Q8IY21 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.27■■■□□ 2.6
DDX60Q8IY21 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
DDX60Q8IY21 ABCB10P1-201ENST00000614297 2181 ntBASIC31.26■■■□□ 2.59
DDX60Q8IY21 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.26■■■□□ 2.59
DDX60Q8IY21 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
DDX60Q8IY21 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.25■■■□□ 2.59
DDX60Q8IY21 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.25■■■□□ 2.59
DDX60Q8IY21 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
DDX60Q8IY21 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
DDX60Q8IY21 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.24■■■□□ 2.59
DDX60Q8IY21 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
DDX60Q8IY21 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
DDX60Q8IY21 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
DDX60Q8IY21 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
DDX60Q8IY21 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.22■■■□□ 2.59
DDX60Q8IY21 AC129492.7-201ENST00000622992 756 ntBASIC31.22■■■□□ 2.59
DDX60Q8IY21 AL359258.2-201ENST00000564063 1566 ntBASIC31.22■■■□□ 2.59
DDX60Q8IY21 ATP5G2P3-201ENST00000429083 425 ntBASIC31.21■■■□□ 2.59
DDX60Q8IY21 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
DDX60Q8IY21 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.2■■■□□ 2.59
DDX60Q8IY21 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.2■■■□□ 2.59
DDX60Q8IY21 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.2■■■□□ 2.59
DDX60Q8IY21 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
DDX60Q8IY21 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
DDX60Q8IY21 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.2■■■□□ 2.58
DDX60Q8IY21 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.19■■■□□ 2.58
DDX60Q8IY21 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
DDX60Q8IY21 AC093536.1-201ENST00000569153 554 ntBASIC31.18■■■□□ 2.58
DDX60Q8IY21 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
DDX60Q8IY21 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.18■■■□□ 2.58
DDX60Q8IY21 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
DDX60Q8IY21 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
DDX60Q8IY21 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.18■■■□□ 2.58
DDX60Q8IY21 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
DDX60Q8IY21 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
DDX60Q8IY21 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
DDX60Q8IY21 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.15■■■□□ 2.58
DDX60Q8IY21 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
DDX60Q8IY21 AC133552.2-201ENST00000619106 1032 ntBASIC31.15■■■□□ 2.58
DDX60Q8IY21 RAP2CP1-202ENST00000605179 643 ntBASIC31.15■■■□□ 2.58
DDX60Q8IY21 SMPD5-203ENST00000639008 1464 ntBASIC31.15■■■□□ 2.58
DDX60Q8IY21 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
DDX60Q8IY21 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
DDX60Q8IY21 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
DDX60Q8IY21 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
DDX60Q8IY21 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DDX60Q8IY21 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.13■■■□□ 2.57
DDX60Q8IY21 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
DDX60Q8IY21 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DDX60Q8IY21 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.12■■■□□ 2.57
DDX60Q8IY21 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
DDX60Q8IY21 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
DDX60Q8IY21 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
DDX60Q8IY21 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
DDX60Q8IY21 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
DDX60Q8IY21 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
DDX60Q8IY21 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.1■■■□□ 2.57
DDX60Q8IY21 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
DDX60Q8IY21 DUX4L9-201ENST00000449051 1259 ntBASIC31.09■■■□□ 2.57
DDX60Q8IY21 SPCS2P3-201ENST00000500401 656 ntBASIC31.09■■■□□ 2.57
DDX60Q8IY21 AC026202.3-201ENST00000600805 1127 ntBASIC31.09■■■□□ 2.57
DDX60Q8IY21 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
DDX60Q8IY21 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
DDX60Q8IY21 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms