Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.01■■□□□ 1.11
LINC00346Q8IVM7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.01■■□□□ 1.11
LINC00346Q8IVM7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00346Q8IVM7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
LINC00346Q8IVM7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22■■□□□ 1.11
LINC00346Q8IVM7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22■■□□□ 1.11
LINC00346Q8IVM7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
LINC00346Q8IVM7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LINC00346Q8IVM7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 LINC01971-201ENST00000617888 1048 ntBASIC21.96■■□□□ 1.11
LINC00346Q8IVM7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00346Q8IVM7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00346Q8IVM7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00346Q8IVM7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00346Q8IVM7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00346Q8IVM7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 AL449106.1-201ENST00000608517 1980 ntBASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC00346Q8IVM7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00346Q8IVM7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC00346Q8IVM7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00346Q8IVM7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00346Q8IVM7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00346Q8IVM7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00346Q8IVM7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.91■■□□□ 1.1
LINC00346Q8IVM7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LINC00346Q8IVM7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LINC00346Q8IVM7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LINC00346Q8IVM7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.89■■□□□ 1.09
LINC00346Q8IVM7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.89■■□□□ 1.09
LINC00346Q8IVM7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.89■■□□□ 1.09
LINC00346Q8IVM7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00346Q8IVM7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00346Q8IVM7 AP004609.3-201ENST00000610705 1884 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L13-201ENST00000554103 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L15-201ENST00000611059 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L11-201ENST00000611504 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L12-201ENST00000614593 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L23-201ENST00000615195 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L24-201ENST00000617576 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L22-201ENST00000618238 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L20-201ENST00000619712 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L14-201ENST00000621227 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L21-201ENST00000622058 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L10-201ENST00000622460 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L25-201ENST00000624915 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00346Q8IVM7 ZNRF2P2-203ENST00000454624 420 ntBASIC21.87■■□□□ 1.09
LINC00346Q8IVM7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00346Q8IVM7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.87■■□□□ 1.09
LINC00346Q8IVM7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.87■■□□□ 1.09
LINC00346Q8IVM7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 WHAMMP3-201ENST00000611636 1609 ntBASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.84■■□□□ 1.09
LINC00346Q8IVM7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00346Q8IVM7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms