Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.01■■□□□ 1.11
LINC00346Q8IVM7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.01■■□□□ 1.11
LINC00346Q8IVM7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00346Q8IVM7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
LINC00346Q8IVM7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22■■□□□ 1.11
LINC00346Q8IVM7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22■■□□□ 1.11
LINC00346Q8IVM7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
LINC00346Q8IVM7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.99■■□□□ 1.11
LINC00346Q8IVM7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LINC00346Q8IVM7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.97■■□□□ 1.11
LINC00346Q8IVM7 LINC01971-201ENST00000617888 1048 ntBASIC21.96■■□□□ 1.11
LINC00346Q8IVM7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00346Q8IVM7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00346Q8IVM7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00346Q8IVM7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00346Q8IVM7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00346Q8IVM7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 AL449106.1-201ENST00000608517 1980 ntBASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00346Q8IVM7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC00346Q8IVM7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00346Q8IVM7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC00346Q8IVM7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00346Q8IVM7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00346Q8IVM7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00346Q8IVM7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00346Q8IVM7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.91■■□□□ 1.1
LINC00346Q8IVM7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00346Q8IVM7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LINC00346Q8IVM7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LINC00346Q8IVM7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LINC00346Q8IVM7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.89■■□□□ 1.09
LINC00346Q8IVM7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.89■■□□□ 1.09
LINC00346Q8IVM7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.89■■□□□ 1.09
LINC00346Q8IVM7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00346Q8IVM7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00346Q8IVM7 AP004609.3-201ENST00000610705 1884 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L13-201ENST00000554103 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L15-201ENST00000611059 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L11-201ENST00000611504 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L12-201ENST00000614593 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L23-201ENST00000615195 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L24-201ENST00000617576 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L22-201ENST00000618238 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L20-201ENST00000619712 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L14-201ENST00000621227 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L21-201ENST00000622058 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L10-201ENST00000622460 1267 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 DUX4L25-201ENST00000624915 1269 ntBASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00346Q8IVM7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00346Q8IVM7 ZNRF2P2-203ENST00000454624 420 ntBASIC21.87■■□□□ 1.09
LINC00346Q8IVM7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00346Q8IVM7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.87■■□□□ 1.09
LINC00346Q8IVM7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.87■■□□□ 1.09
LINC00346Q8IVM7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.86■■□□□ 1.09
LINC00346Q8IVM7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 WHAMMP3-201ENST00000611636 1609 ntBASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.85■■□□□ 1.09
LINC00346Q8IVM7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.84■■□□□ 1.09
LINC00346Q8IVM7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00346Q8IVM7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms