Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 AC020928.2-201ENST00000588717 2197 ntBASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 WHAMMP2-203ENST00000563942 1603 ntBASIC22.76■■□□□ 1.23
PTCHD4Q6ZW05 MIR3665-201ENST00000578708 105 ntBASIC22.76■■□□□ 1.23
PTCHD4Q6ZW05 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
PTCHD4Q6ZW05 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.75■■□□□ 1.23
PTCHD4Q6ZW05 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PTCHD4Q6ZW05 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.75■■□□□ 1.23
PTCHD4Q6ZW05 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
PTCHD4Q6ZW05 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PTCHD4Q6ZW05 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCHD4Q6ZW05 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCHD4Q6ZW05 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 LINC00273-201ENST00000539813 1452 ntBASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 AP006261.1-201ENST00000584783 668 ntBASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.68■■□□□ 1.22
PTCHD4Q6ZW05 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCHD4Q6ZW05 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCHD4Q6ZW05 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCHD4Q6ZW05 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PTCHD4Q6ZW05 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.67■■□□□ 1.22
PTCHD4Q6ZW05 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PTCHD4Q6ZW05 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PTCHD4Q6ZW05 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PTCHD4Q6ZW05 AC087741.3-201ENST00000624270 1347 ntBASIC22.66■■□□□ 1.22
PTCHD4Q6ZW05 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.66■■□□□ 1.22
PTCHD4Q6ZW05 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.66■■□□□ 1.22
PTCHD4Q6ZW05 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.65■■□□□ 1.22
PTCHD4Q6ZW05 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PTCHD4Q6ZW05 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PTCHD4Q6ZW05 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PTCHD4Q6ZW05 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
PTCHD4Q6ZW05 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
PTCHD4Q6ZW05 AL162393.1-201ENST00000437852 946 ntBASIC22.64■■□□□ 1.21
PTCHD4Q6ZW05 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PTCHD4Q6ZW05 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PTCHD4Q6ZW05 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PTCHD4Q6ZW05 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PTCHD4Q6ZW05 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 AC092803.2-201ENST00000564287 1899 ntBASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 DUSP8P4-201ENST00000399538 1761 ntBASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCHD4Q6ZW05 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCHD4Q6ZW05 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
PTCHD4Q6ZW05 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.61■■□□□ 1.21
PTCHD4Q6ZW05 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCHD4Q6ZW05 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PTCHD4Q6ZW05 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PTCHD4Q6ZW05 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PTCHD4Q6ZW05 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.59■■□□□ 1.21
PTCHD4Q6ZW05 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PTCHD4Q6ZW05 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PTCHD4Q6ZW05 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PTCHD4Q6ZW05 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.58■■□□□ 1.21
PTCHD4Q6ZW05 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
PTCHD4Q6ZW05 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.58■■□□□ 1.21
PTCHD4Q6ZW05 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms