Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 AC020928.2-201ENST00000588717 2197 ntBASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PTCHD4Q6ZW05 WHAMMP2-203ENST00000563942 1603 ntBASIC22.76■■□□□ 1.23
PTCHD4Q6ZW05 MIR3665-201ENST00000578708 105 ntBASIC22.76■■□□□ 1.23
PTCHD4Q6ZW05 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
PTCHD4Q6ZW05 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.75■■□□□ 1.23
PTCHD4Q6ZW05 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PTCHD4Q6ZW05 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.75■■□□□ 1.23
PTCHD4Q6ZW05 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.74■■□□□ 1.23
PTCHD4Q6ZW05 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
PTCHD4Q6ZW05 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PTCHD4Q6ZW05 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCHD4Q6ZW05 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCHD4Q6ZW05 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCHD4Q6ZW05 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 LINC00273-201ENST00000539813 1452 ntBASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.71■■□□□ 1.23
PTCHD4Q6ZW05 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 AP006261.1-201ENST00000584783 668 ntBASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PTCHD4Q6ZW05 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCHD4Q6ZW05 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.68■■□□□ 1.22
PTCHD4Q6ZW05 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCHD4Q6ZW05 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCHD4Q6ZW05 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCHD4Q6ZW05 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PTCHD4Q6ZW05 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.67■■□□□ 1.22
PTCHD4Q6ZW05 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PTCHD4Q6ZW05 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PTCHD4Q6ZW05 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PTCHD4Q6ZW05 AC087741.3-201ENST00000624270 1347 ntBASIC22.66■■□□□ 1.22
PTCHD4Q6ZW05 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.66■■□□□ 1.22
PTCHD4Q6ZW05 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.66■■□□□ 1.22
PTCHD4Q6ZW05 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.65■■□□□ 1.22
PTCHD4Q6ZW05 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PTCHD4Q6ZW05 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PTCHD4Q6ZW05 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PTCHD4Q6ZW05 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
PTCHD4Q6ZW05 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
PTCHD4Q6ZW05 AL162393.1-201ENST00000437852 946 ntBASIC22.64■■□□□ 1.21
PTCHD4Q6ZW05 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PTCHD4Q6ZW05 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PTCHD4Q6ZW05 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PTCHD4Q6ZW05 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PTCHD4Q6ZW05 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 AC092803.2-201ENST00000564287 1899 ntBASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 DUSP8P4-201ENST00000399538 1761 ntBASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PTCHD4Q6ZW05 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCHD4Q6ZW05 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCHD4Q6ZW05 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
PTCHD4Q6ZW05 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.61■■□□□ 1.21
PTCHD4Q6ZW05 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCHD4Q6ZW05 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PTCHD4Q6ZW05 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PTCHD4Q6ZW05 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PTCHD4Q6ZW05 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.59■■□□□ 1.21
PTCHD4Q6ZW05 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PTCHD4Q6ZW05 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PTCHD4Q6ZW05 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PTCHD4Q6ZW05 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.58■■□□□ 1.21
PTCHD4Q6ZW05 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
PTCHD4Q6ZW05 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.58■■□□□ 1.21
PTCHD4Q6ZW05 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms