Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
SGO1Q5FBB7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
SGO1Q5FBB7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SGO1Q5FBB7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
SGO1Q5FBB7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SGO1Q5FBB7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SGO1Q5FBB7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SGO1Q5FBB7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SGO1Q5FBB7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
SGO1Q5FBB7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.08■■□□□ 1.45
SGO1Q5FBB7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SGO1Q5FBB7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.08■■□□□ 1.45
SGO1Q5FBB7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.08■■□□□ 1.45
SGO1Q5FBB7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SGO1Q5FBB7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
SGO1Q5FBB7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
SGO1Q5FBB7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SGO1Q5FBB7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SGO1Q5FBB7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SGO1Q5FBB7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.06■■□□□ 1.44
SGO1Q5FBB7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.06■■□□□ 1.44
SGO1Q5FBB7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.06■■□□□ 1.44
SGO1Q5FBB7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
SGO1Q5FBB7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SGO1Q5FBB7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SGO1Q5FBB7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.05■■□□□ 1.44
SGO1Q5FBB7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
SGO1Q5FBB7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.05■■□□□ 1.44
SGO1Q5FBB7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.05■■□□□ 1.44
SGO1Q5FBB7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.05■■□□□ 1.44
SGO1Q5FBB7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.05■■□□□ 1.44
SGO1Q5FBB7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.04■■□□□ 1.44
SGO1Q5FBB7 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.04■■□□□ 1.44
SGO1Q5FBB7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SGO1Q5FBB7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
SGO1Q5FBB7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SGO1Q5FBB7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SGO1Q5FBB7 LINC01971-201ENST00000617888 1048 ntBASIC24.02■■□□□ 1.44
SGO1Q5FBB7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SGO1Q5FBB7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.02■■□□□ 1.44
SGO1Q5FBB7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SGO1Q5FBB7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.01■■□□□ 1.43
SGO1Q5FBB7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SGO1Q5FBB7 AL449106.1-201ENST00000608517 1980 ntBASIC24■■□□□ 1.43
SGO1Q5FBB7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SGO1Q5FBB7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24■■□□□ 1.43
SGO1Q5FBB7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SGO1Q5FBB7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SGO1Q5FBB7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SGO1Q5FBB7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
SGO1Q5FBB7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.99■■□□□ 1.43
SGO1Q5FBB7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SGO1Q5FBB7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SGO1Q5FBB7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SGO1Q5FBB7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SGO1Q5FBB7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SGO1Q5FBB7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SGO1Q5FBB7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SGO1Q5FBB7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SGO1Q5FBB7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
SGO1Q5FBB7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.97■■□□□ 1.43
SGO1Q5FBB7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SGO1Q5FBB7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.96■■□□□ 1.43
SGO1Q5FBB7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.96■■□□□ 1.43
SGO1Q5FBB7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.96■■□□□ 1.43
SGO1Q5FBB7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SGO1Q5FBB7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.95■■□□□ 1.42
SGO1Q5FBB7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.95■■□□□ 1.42
SGO1Q5FBB7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 AP004609.3-201ENST00000610705 1884 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 ZNRF2P2-203ENST00000454624 420 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L13-201ENST00000554103 1267 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L15-201ENST00000611059 1267 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L11-201ENST00000611504 1267 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L12-201ENST00000614593 1267 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L23-201ENST00000615195 1269 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L24-201ENST00000617576 1269 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L22-201ENST00000618238 1269 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L20-201ENST00000619712 1269 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L14-201ENST00000621227 1267 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L21-201ENST00000622058 1269 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L10-201ENST00000622460 1267 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DUX4L25-201ENST00000624915 1269 ntBASIC23.94■■□□□ 1.42
SGO1Q5FBB7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SGO1Q5FBB7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
SGO1Q5FBB7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SGO1Q5FBB7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.93■■□□□ 1.42
SGO1Q5FBB7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SGO1Q5FBB7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SGO1Q5FBB7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms