Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRPXP78539 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRPXP78539 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SRPXP78539 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRPXP78539 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.44■□□□□ 0.86
SRPXP78539 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRPXP78539 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SRPXP78539 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRPXP78539 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
SRPXP78539 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SRPXP78539 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRPXP78539 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SRPXP78539 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRPXP78539 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SRPXP78539 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.41■□□□□ 0.86
SRPXP78539 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRPXP78539 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRPXP78539 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRPXP78539 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.41■□□□□ 0.86
SRPXP78539 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRPXP78539 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRPXP78539 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.41■□□□□ 0.86
SRPXP78539 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRPXP78539 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SRPXP78539 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SRPXP78539 AP004609.3-201ENST00000610705 1884 ntBASIC20.39■□□□□ 0.86
SRPXP78539 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SRPXP78539 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SRPXP78539 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SRPXP78539 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SRPXP78539 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SRPXP78539 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.39■□□□□ 0.85
SRPXP78539 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SRPXP78539 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRPXP78539 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRPXP78539 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.38■□□□□ 0.85
SRPXP78539 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRPXP78539 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SRPXP78539 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.37■□□□□ 0.85
SRPXP78539 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
SRPXP78539 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.37■□□□□ 0.85
SRPXP78539 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRPXP78539 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRPXP78539 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.37■□□□□ 0.85
SRPXP78539 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SRPXP78539 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SRPXP78539 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRPXP78539 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRPXP78539 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SRPXP78539 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.36■□□□□ 0.85
SRPXP78539 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRPXP78539 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SRPXP78539 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRPXP78539 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRPXP78539 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.35■□□□□ 0.85
SRPXP78539 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.35■□□□□ 0.85
SRPXP78539 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.35■□□□□ 0.85
SRPXP78539 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRPXP78539 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SRPXP78539 WHAMMP2-203ENST00000563942 1603 ntBASIC20.35■□□□□ 0.85
SRPXP78539 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRPXP78539 AC093323.1-202ENST00000635031 2045 ntBASIC20.34■□□□□ 0.85
SRPXP78539 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.33■□□□□ 0.85
SRPXP78539 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SRPXP78539 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRPXP78539 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SRPXP78539 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRPXP78539 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SRPXP78539 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRPXP78539 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRPXP78539 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRPXP78539 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRPXP78539 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.32■□□□□ 0.84
SRPXP78539 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRPXP78539 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRPXP78539 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.31■□□□□ 0.84
SRPXP78539 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.31■□□□□ 0.84
SRPXP78539 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.31■□□□□ 0.84
SRPXP78539 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.31■□□□□ 0.84
SRPXP78539 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.31■□□□□ 0.84
SRPXP78539 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.31■□□□□ 0.84
SRPXP78539 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.31■□□□□ 0.84
SRPXP78539 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRPXP78539 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRPXP78539 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SRPXP78539 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.3■□□□□ 0.84
SRPXP78539 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRPXP78539 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRPXP78539 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRPXP78539 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRPXP78539 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SRPXP78539 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.29■□□□□ 0.84
SRPXP78539 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRPXP78539 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.29■□□□□ 0.84
SRPXP78539 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SRPXP78539 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SRPXP78539 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRPXP78539 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRPXP78539 AC142472.1-201ENST00000612013 1741 ntBASIC20.28■□□□□ 0.84
SRPXP78539 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms