Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 AC103834.1-201ENST00000520383 144 ntBASIC32.53■■■□□ 2.8
KCNQ4P56696 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC32.53■■■□□ 2.8
KCNQ4P56696 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
KCNQ4P56696 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC32.52■■■□□ 2.8
KCNQ4P56696 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.52■■■□□ 2.8
KCNQ4P56696 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
KCNQ4P56696 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
KCNQ4P56696 PVT1_1.1-201ENST00000615125 194 ntBASIC32.5■■■□□ 2.79
KCNQ4P56696 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
KCNQ4P56696 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.5■■■□□ 2.79
KCNQ4P56696 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
KCNQ4P56696 RP9P-202ENST00000450133 1212 ntBASIC32.49■■■□□ 2.79
KCNQ4P56696 THA1P-201ENST00000590384 1145 ntBASIC32.49■■■□□ 2.79
KCNQ4P56696 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
KCNQ4P56696 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
KCNQ4P56696 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
KCNQ4P56696 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
KCNQ4P56696 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.47■■■□□ 2.79
KCNQ4P56696 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
KCNQ4P56696 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.46■■■□□ 2.79
KCNQ4P56696 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC32.46■■■□□ 2.79
KCNQ4P56696 AC025884.2-201ENST00000553429 711 ntBASIC32.46■■■□□ 2.79
KCNQ4P56696 AC093536.1-201ENST00000569153 554 ntBASIC32.46■■■□□ 2.79
KCNQ4P56696 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
KCNQ4P56696 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.45■■■□□ 2.79
KCNQ4P56696 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
KCNQ4P56696 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
KCNQ4P56696 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
KCNQ4P56696 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
KCNQ4P56696 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
KCNQ4P56696 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
KCNQ4P56696 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
KCNQ4P56696 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
KCNQ4P56696 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
KCNQ4P56696 RAP2CP1-202ENST00000605179 643 ntBASIC32.43■■■□□ 2.78
KCNQ4P56696 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
KCNQ4P56696 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
KCNQ4P56696 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC32.42■■■□□ 2.78
KCNQ4P56696 HES6-204ENST00000409182 863 ntTSL 2 BASIC32.41■■■□□ 2.78
KCNQ4P56696 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC32.41■■■□□ 2.78
KCNQ4P56696 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
KCNQ4P56696 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
KCNQ4P56696 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
KCNQ4P56696 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
KCNQ4P56696 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.4■■■□□ 2.78
KCNQ4P56696 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC32.4■■■□□ 2.78
KCNQ4P56696 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC32.4■■■□□ 2.78
KCNQ4P56696 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
KCNQ4P56696 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
KCNQ4P56696 GUSBP5-201ENST00000418136 578 ntBASIC32.39■■■□□ 2.78
KCNQ4P56696 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
KCNQ4P56696 AC100797.4-201ENST00000631653 1827 ntBASIC32.38■■■□□ 2.77
KCNQ4P56696 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.38■■■□□ 2.77
KCNQ4P56696 OR2A1-AS1-204ENST00000470435 602 ntBASIC32.38■■■□□ 2.77
KCNQ4P56696 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
KCNQ4P56696 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC32.37■■■□□ 2.77
KCNQ4P56696 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.37■■■□□ 2.77
KCNQ4P56696 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC32.37■■■□□ 2.77
KCNQ4P56696 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
KCNQ4P56696 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC32.36■■■□□ 2.77
KCNQ4P56696 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
KCNQ4P56696 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
KCNQ4P56696 AC139795.1-202ENST00000500444 432 ntBASIC32.36■■■□□ 2.77
KCNQ4P56696 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.36■■■□□ 2.77
KCNQ4P56696 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
KCNQ4P56696 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
KCNQ4P56696 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
KCNQ4P56696 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
KCNQ4P56696 YBX1P4-201ENST00000392794 808 ntBASIC32.35■■■□□ 2.77
KCNQ4P56696 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC32.35■■■□□ 2.77
KCNQ4P56696 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.34■■■□□ 2.77
KCNQ4P56696 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
KCNQ4P56696 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
KCNQ4P56696 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC32.34■■■□□ 2.77
KCNQ4P56696 AC074183.2-201ENST00000623112 922 ntBASIC32.33■■■□□ 2.77
KCNQ4P56696 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
KCNQ4P56696 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC32.32■■■□□ 2.76
KCNQ4P56696 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
KCNQ4P56696 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
KCNQ4P56696 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
KCNQ4P56696 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
KCNQ4P56696 MIR6765-201ENST00000614092 87 ntBASIC32.31■■■□□ 2.76
KCNQ4P56696 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
KCNQ4P56696 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
KCNQ4P56696 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC32.3■■■□□ 2.76
KCNQ4P56696 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
KCNQ4P56696 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
KCNQ4P56696 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
KCNQ4P56696 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC32.3■■■□□ 2.76
KCNQ4P56696 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
KCNQ4P56696 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC32.3■■■□□ 2.76
KCNQ4P56696 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
KCNQ4P56696 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
KCNQ4P56696 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
KCNQ4P56696 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC32.29■■■□□ 2.76
KCNQ4P56696 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC32.28■■■□□ 2.76
KCNQ4P56696 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC32.28■■■□□ 2.76
KCNQ4P56696 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.27■■■□□ 2.76
KCNQ4P56696 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC32.27■■■□□ 2.76
KCNQ4P56696 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms