Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TMEM50BP56557 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TMEM50BP56557 DUX4L28-201ENST00000623687 678 ntBASIC21.12■□□□□ 0.97
TMEM50BP56557 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.12■□□□□ 0.97
TMEM50BP56557 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM50BP56557 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM50BP56557 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEM50BP56557 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM50BP56557 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEM50BP56557 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM50BP56557 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.1■□□□□ 0.97
TMEM50BP56557 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM50BP56557 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM50BP56557 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM50BP56557 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.09■□□□□ 0.97
TMEM50BP56557 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM50BP56557 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM50BP56557 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM50BP56557 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM50BP56557 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM50BP56557 AP004609.3-201ENST00000610705 1884 ntBASIC21.08■□□□□ 0.97
TMEM50BP56557 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEM50BP56557 DUSP8P4-201ENST00000399538 1761 ntBASIC21.08■□□□□ 0.96
TMEM50BP56557 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.07■□□□□ 0.96
TMEM50BP56557 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM50BP56557 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.07■□□□□ 0.96
TMEM50BP56557 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TMEM50BP56557 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM50BP56557 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.07■□□□□ 0.96
TMEM50BP56557 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM50BP56557 AC092803.2-201ENST00000564287 1899 ntBASIC21.07■□□□□ 0.96
TMEM50BP56557 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM50BP56557 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM50BP56557 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM50BP56557 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TMEM50BP56557 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM50BP56557 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
TMEM50BP56557 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM50BP56557 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM50BP56557 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM50BP56557 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TMEM50BP56557 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM50BP56557 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM50BP56557 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
TMEM50BP56557 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.03■□□□□ 0.96
TMEM50BP56557 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM50BP56557 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM50BP56557 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM50BP56557 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.02■□□□□ 0.96
TMEM50BP56557 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TMEM50BP56557 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.01■□□□□ 0.95
TMEM50BP56557 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.01■□□□□ 0.95
TMEM50BP56557 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TMEM50BP56557 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM50BP56557 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM50BP56557 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.01■□□□□ 0.95
TMEM50BP56557 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEM50BP56557 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM50BP56557 MIR3665-201ENST00000578708 105 ntBASIC21■□□□□ 0.95
TMEM50BP56557 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21■□□□□ 0.95
TMEM50BP56557 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TMEM50BP56557 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM50BP56557 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM50BP56557 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM50BP56557 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM50BP56557 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM50BP56557 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM50BP56557 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM50BP56557 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TMEM50BP56557 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM50BP56557 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM50BP56557 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM50BP56557 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMEM50BP56557 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM50BP56557 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.97■□□□□ 0.95
TMEM50BP56557 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TMEM50BP56557 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM50BP56557 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.97■□□□□ 0.95
TMEM50BP56557 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM50BP56557 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TMEM50BP56557 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TMEM50BP56557 AC110285.7-201ENST00000624417 1536 ntBASIC20.96■□□□□ 0.95
TMEM50BP56557 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms