Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TMEM50BP56557 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TMEM50BP56557 DUX4L28-201ENST00000623687 678 ntBASIC21.12■□□□□ 0.97
TMEM50BP56557 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.12■□□□□ 0.97
TMEM50BP56557 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM50BP56557 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM50BP56557 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEM50BP56557 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM50BP56557 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEM50BP56557 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM50BP56557 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.1■□□□□ 0.97
TMEM50BP56557 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM50BP56557 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM50BP56557 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM50BP56557 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.09■□□□□ 0.97
TMEM50BP56557 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM50BP56557 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM50BP56557 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM50BP56557 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM50BP56557 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM50BP56557 AP004609.3-201ENST00000610705 1884 ntBASIC21.08■□□□□ 0.97
TMEM50BP56557 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEM50BP56557 DUSP8P4-201ENST00000399538 1761 ntBASIC21.08■□□□□ 0.96
TMEM50BP56557 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.07■□□□□ 0.96
TMEM50BP56557 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM50BP56557 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.07■□□□□ 0.96
TMEM50BP56557 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TMEM50BP56557 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM50BP56557 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.07■□□□□ 0.96
TMEM50BP56557 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM50BP56557 AC092803.2-201ENST00000564287 1899 ntBASIC21.07■□□□□ 0.96
TMEM50BP56557 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM50BP56557 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM50BP56557 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM50BP56557 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TMEM50BP56557 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM50BP56557 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
TMEM50BP56557 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM50BP56557 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM50BP56557 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM50BP56557 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TMEM50BP56557 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM50BP56557 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM50BP56557 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
TMEM50BP56557 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.03■□□□□ 0.96
TMEM50BP56557 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM50BP56557 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM50BP56557 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM50BP56557 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.02■□□□□ 0.96
TMEM50BP56557 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TMEM50BP56557 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.01■□□□□ 0.95
TMEM50BP56557 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.01■□□□□ 0.95
TMEM50BP56557 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TMEM50BP56557 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM50BP56557 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM50BP56557 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.01■□□□□ 0.95
TMEM50BP56557 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEM50BP56557 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM50BP56557 MIR3665-201ENST00000578708 105 ntBASIC21■□□□□ 0.95
TMEM50BP56557 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21■□□□□ 0.95
TMEM50BP56557 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TMEM50BP56557 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM50BP56557 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM50BP56557 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM50BP56557 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM50BP56557 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM50BP56557 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM50BP56557 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM50BP56557 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TMEM50BP56557 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM50BP56557 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM50BP56557 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM50BP56557 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMEM50BP56557 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM50BP56557 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.97■□□□□ 0.95
TMEM50BP56557 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TMEM50BP56557 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM50BP56557 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.97■□□□□ 0.95
TMEM50BP56557 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM50BP56557 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM50BP56557 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TMEM50BP56557 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TMEM50BP56557 AC110285.7-201ENST00000624417 1536 ntBASIC20.96■□□□□ 0.95
TMEM50BP56557 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM50BP56557 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms