Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 YOL099CYOL099C 492 nt10.01□□□□□ -0.81
SSM4P40318 SSC1YJR045C 1965 nt10□□□□□ -0.81
SSM4P40318 PHO85YPL031C 918 nt10□□□□□ -0.81
SSM4P40318 IRC5YFR038W 2562 nt9.98□□□□□ -0.81
SSM4P40318 BEM1YBR200W 1656 nt9.98□□□□□ -0.81
SSM4P40318 FIT2YOR382W 462 nt9.97□□□□□ -0.81
SSM4P40318 RPL2BYIL018W 765 nt9.96□□□□□ -0.82
SSM4P40318 REC107YJR021C 945 nt9.96□□□□□ -0.82
SSM4P40318 ENB1YOL158C 1821 nt9.96□□□□□ -0.82
SSM4P40318 MRPL35YDR322W 1104 nt9.95□□□□□ -0.82
SSM4P40318 YPR076WYPR076W 375 nt9.95□□□□□ -0.82
SSM4P40318 SEC24YIL109C 2781 nt9.95□□□□□ -0.82
SSM4P40318 TOK1YJL093C 2076 nt9.95□□□□□ -0.82
SSM4P40318 SRY1YKL218C 981 nt9.94□□□□□ -0.82
SSM4P40318 MSC3YLR219W 2187 nt9.94□□□□□ -0.82
SSM4P40318 CAN1YEL063C 1773 nt9.93□□□□□ -0.82
SSM4P40318 CRH1YGR189C 1524 nt9.93□□□□□ -0.82
SSM4P40318 RPL31BYLR406C 342 nt9.92□□□□□ -0.82
SSM4P40318 LSC1YOR142W 990 nt9.92□□□□□ -0.82
SSM4P40318 ICP55YER078C 1536 nt9.92□□□□□ -0.82
SSM4P40318 FMP40YPL222W 2067 nt9.92□□□□□ -0.82
SSM4P40318 LIA1YJR070C 978 nt9.91□□□□□ -0.82
SSM4P40318 MRPL19YNL185C 477 nt9.91□□□□□ -0.82
SSM4P40318 PRB1YEL060C 1908 nt9.9□□□□□ -0.82
SSM4P40318 PPH21YDL134C 1110 nt9.9□□□□□ -0.82
SSM4P40318 PMP3YDR276C 168 nt9.9□□□□□ -0.82
SSM4P40318 SUN4YNL066W 1263 nt9.9□□□□□ -0.82
SSM4P40318 NUP49YGL172W 1419 nt9.9□□□□□ -0.82
SSM4P40318 FCY22YER060W-A 1593 nt9.9□□□□□ -0.82
SSM4P40318 ITR1YDR497C 1755 nt9.9□□□□□ -0.82
SSM4P40318 HOC1YJR075W 1191 nt9.88□□□□□ -0.83
SSM4P40318 MSG5YNL053W 1470 nt9.88□□□□□ -0.83
SSM4P40318 NPP1YCR026C 2229 nt9.88□□□□□ -0.83
SSM4P40318 GPD1YDL022W 1176 nt9.87□□□□□ -0.83
SSM4P40318 YGL102CYGL102C 429 nt9.87□□□□□ -0.83
SSM4P40318 SEC62YPL094C 825 nt9.87□□□□□ -0.83
SSM4P40318 LCL3YGL085W 825 nt9.86□□□□□ -0.83
SSM4P40318 CBR1YIL043C 855 nt9.86□□□□□ -0.83
SSM4P40318 YKL102CYKL102C 306 nt9.86□□□□□ -0.83
SSM4P40318 SPG5YMR191W 1122 nt9.86□□□□□ -0.83
SSM4P40318 YPR127WYPR127W 1038 nt9.86□□□□□ -0.83
SSM4P40318 TOD6YBL054W 1578 nt9.86□□□□□ -0.83
SSM4P40318 YER137CYER137C 447 nt9.85□□□□□ -0.83
SSM4P40318 LOT6YLR011W 576 nt9.85□□□□□ -0.83
SSM4P40318 CEM1YER061C 1329 nt9.85□□□□□ -0.83
SSM4P40318 DLD1YDL174C 1764 nt9.85□□□□□ -0.83
SSM4P40318 COX15YER141W 1461 nt9.85□□□□□ -0.83
SSM4P40318 ASR1YPR093C 867 nt9.84□□□□□ -0.83
SSM4P40318 SMX3YPR182W 261 nt9.84□□□□□ -0.83
SSM4P40318 ILV6YCL009C 930 nt9.84□□□□□ -0.83
SSM4P40318 NUP84YDL116W 2181 nt9.84□□□□□ -0.83
SSM4P40318 PRI1YIR008C 1230 nt9.83□□□□□ -0.84
SSM4P40318 YNL092WYNL092W 1203 nt9.82□□□□□ -0.84
SSM4P40318 YRF1-1YDR545W 5391 nt9.82□□□□□ -0.84
SSM4P40318 YRF1-5YLR467W 5391 nt9.82□□□□□ -0.84
SSM4P40318 YRF1-8YOR396W 5391 nt9.82□□□□□ -0.84
SSM4P40318 AIM20YIL158W 615 nt9.82□□□□□ -0.84
SSM4P40318 YLL056CYLL056C 897 nt9.82□□□□□ -0.84
SSM4P40318 FCP1YMR277W 2199 nt9.81□□□□□ -0.84
SSM4P40318 SNF4YGL115W 969 nt9.8□□□□□ -0.84
SSM4P40318 MIX17YMR002W 471 nt9.8□□□□□ -0.84
SSM4P40318 DOT1YDR440W 1749 nt9.79□□□□□ -0.84
SSM4P40318 TDP1YBR223C 1635 nt9.79□□□□□ -0.84
SSM4P40318 HED1YDR014W-A 489 nt9.79□□□□□ -0.84
SSM4P40318 URH1YDR400W 1023 nt9.79□□□□□ -0.84
SSM4P40318 PTC7YHR076W 1032 nt9.79□□□□□ -0.84
SSM4P40318 LPD1YFL018C 1500 nt9.78□□□□□ -0.84
SSM4P40318 YMR253CYMR253C 1245 nt9.78□□□□□ -0.84
SSM4P40318 MRPS28YDR337W 861 nt9.77□□□□□ -0.85
SSM4P40318 YRF1-3YGR296W 5580 nt9.76□□□□□ -0.85
SSM4P40318 YRF1-6YNL339C 5580 nt9.76□□□□□ -0.85
SSM4P40318 YRF1-7YPL283C 5580 nt9.76□□□□□ -0.85
SSM4P40318 VBA5YKR105C 1749 nt9.76□□□□□ -0.85
SSM4P40318 YHR218W-AYHR218W-A 318 nt9.76□□□□□ -0.85
SSM4P40318 YBL112CYBL112C 318 nt9.76□□□□□ -0.85
SSM4P40318 YOR012WYOR012W 414 nt9.76□□□□□ -0.85
SSM4P40318 YKL153WYKL153W 510 nt9.75□□□□□ -0.85
SSM4P40318 MDH1YKL085W 1005 nt9.74□□□□□ -0.85
SSM4P40318 SCS22YBL091C-A 528 nt9.74□□□□□ -0.85
SSM4P40318 YBR113WYBR113W 483 nt9.74□□□□□ -0.85
SSM4P40318 SAL1YNL083W 1485 nt9.73□□□□□ -0.85
SSM4P40318 YKL077WYKL077W 1179 nt9.73□□□□□ -0.85
SSM4P40318 SNT309YPR101W 528 nt9.73□□□□□ -0.85
SSM4P40318 TUF1YOR187W 1314 nt9.72□□□□□ -0.85
SSM4P40318 MRPL28YDR462W 444 nt9.72□□□□□ -0.85
SSM4P40318 YIL029W-AYIL029W-A 372 nt9.72□□□□□ -0.85
SSM4P40318 ADE5,7YGL234W 2409 nt9.71□□□□□ -0.86
SSM4P40318 TRS31YDR472W 852 nt9.7□□□□□ -0.86
SSM4P40318 ASF1YJL115W 840 nt9.69□□□□□ -0.86
SSM4P40318 YLR112WYLR112W 420 nt9.69□□□□□ -0.86
SSM4P40318 ERR1YOR393W 1314 nt9.69□□□□□ -0.86
SSM4P40318 ERR2YPL281C 1314 nt9.69□□□□□ -0.86
SSM4P40318 MRPL23YOR150W 492 nt9.68□□□□□ -0.86
SSM4P40318 RBS1YDL189W 1374 nt9.67□□□□□ -0.86
SSM4P40318 YCR041WYCR041W 333 nt9.67□□□□□ -0.86
SSM4P40318 OPI7YDR360W 435 nt9.67□□□□□ -0.86
SSM4P40318 ATP10YLR393W 840 nt9.67□□□□□ -0.86
SSM4P40318 YMR252CYMR252C 405 nt9.67□□□□□ -0.86
SSM4P40318 YNL190WYNL190W 615 nt9.67□□□□□ -0.86
SSM4P40318 PAC2YER007W 1557 nt9.67□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms