Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.41■■■□□ 2.62
CHRNA5P30532 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHRNA5P30532 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.4■■■□□ 2.62
CHRNA5P30532 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.4■■■□□ 2.62
CHRNA5P30532 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.4■■■□□ 2.62
CHRNA5P30532 THA1P-201ENST00000590384 1145 ntBASIC31.4■■■□□ 2.62
CHRNA5P30532 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.4■■■□□ 2.62
CHRNA5P30532 AC025884.2-201ENST00000553429 711 ntBASIC31.39■■■□□ 2.62
CHRNA5P30532 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHRNA5P30532 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHRNA5P30532 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHRNA5P30532 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.37■■■□□ 2.61
CHRNA5P30532 AC093536.1-201ENST00000569153 554 ntBASIC31.37■■■□□ 2.61
CHRNA5P30532 PVT1_1.1-201ENST00000615125 194 ntBASIC31.37■■■□□ 2.61
CHRNA5P30532 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
CHRNA5P30532 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.37■■■□□ 2.61
CHRNA5P30532 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.36■■■□□ 2.61
CHRNA5P30532 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.36■■■□□ 2.61
CHRNA5P30532 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHRNA5P30532 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.36■■■□□ 2.61
CHRNA5P30532 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.36■■■□□ 2.61
CHRNA5P30532 RAP2CP1-202ENST00000605179 643 ntBASIC31.36■■■□□ 2.61
CHRNA5P30532 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CHRNA5P30532 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHRNA5P30532 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CHRNA5P30532 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHRNA5P30532 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHRNA5P30532 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
CHRNA5P30532 AC074183.2-201ENST00000623112 922 ntBASIC31.35■■■□□ 2.61
CHRNA5P30532 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHRNA5P30532 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHRNA5P30532 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.34■■■□□ 2.61
CHRNA5P30532 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CHRNA5P30532 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHRNA5P30532 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.33■■■□□ 2.61
CHRNA5P30532 GUSBP5-201ENST00000418136 578 ntBASIC31.33■■■□□ 2.61
CHRNA5P30532 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.33■■■□□ 2.61
CHRNA5P30532 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.33■■■□□ 2.61
CHRNA5P30532 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHRNA5P30532 YBX1P4-201ENST00000392794 808 ntBASIC31.32■■■□□ 2.6
CHRNA5P30532 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHRNA5P30532 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
CHRNA5P30532 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHRNA5P30532 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
CHRNA5P30532 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.31■■■□□ 2.6
CHRNA5P30532 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.31■■■□□ 2.6
CHRNA5P30532 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.31■■■□□ 2.6
CHRNA5P30532 AC139795.1-202ENST00000500444 432 ntBASIC31.31■■■□□ 2.6
CHRNA5P30532 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
CHRNA5P30532 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
CHRNA5P30532 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHRNA5P30532 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHRNA5P30532 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHRNA5P30532 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
CHRNA5P30532 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.29■■■□□ 2.6
CHRNA5P30532 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHRNA5P30532 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHRNA5P30532 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CHRNA5P30532 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.28■■■□□ 2.6
CHRNA5P30532 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.27■■■□□ 2.6
CHRNA5P30532 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHRNA5P30532 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.27■■■□□ 2.6
CHRNA5P30532 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CHRNA5P30532 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.26■■■□□ 2.59
CHRNA5P30532 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.26■■■□□ 2.59
CHRNA5P30532 MIR6765-201ENST00000614092 87 ntBASIC31.26■■■□□ 2.59
CHRNA5P30532 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.25■■■□□ 2.59
CHRNA5P30532 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHRNA5P30532 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
CHRNA5P30532 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
CHRNA5P30532 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
CHRNA5P30532 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHRNA5P30532 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
CHRNA5P30532 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHRNA5P30532 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.23■■■□□ 2.59
CHRNA5P30532 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.23■■■□□ 2.59
CHRNA5P30532 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHRNA5P30532 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHRNA5P30532 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHRNA5P30532 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
CHRNA5P30532 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.22■■■□□ 2.59
CHRNA5P30532 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CHRNA5P30532 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.22■■■□□ 2.59
CHRNA5P30532 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHRNA5P30532 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
CHRNA5P30532 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHRNA5P30532 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.2■■■□□ 2.59
CHRNA5P30532 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
CHRNA5P30532 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.2■■■□□ 2.59
CHRNA5P30532 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CHRNA5P30532 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.2■■■□□ 2.59
CHRNA5P30532 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.59
CHRNA5P30532 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHRNA5P30532 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHRNA5P30532 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.19■■■□□ 2.58
CHRNA5P30532 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.18■■■□□ 2.58
CHRNA5P30532 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CHRNA5P30532 AC100797.4-201ENST00000631653 1827 ntBASIC31.18■■■□□ 2.58
CHRNA5P30532 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHRNA5P30532 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms