Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.16■■□□□ 1.141e-6■■■■□ 20.9
SFPQP23246 NECAB3-215ENST00000494174 859 ntTSL 521.88■■□□□ 1.091e-6■■■■□ 20.9
SFPQP23246 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.091e-6■■■■□ 20.9
SFPQP23246 NECAB3-220ENST00000606699 1022 ntTSL 220.81■□□□□ 0.921e-6■■■■□ 20.9
SFPQP23246 NECAB3-214ENST00000493590 625 ntTSL 518.74■□□□□ 0.591e-6■■■■□ 20.9
SFPQP23246 NECAB3-203ENST00000439478 925 ntTSL 516.15■□□□□ 0.181e-6■■■■□ 20.9
SFPQP23246 NECAB3-219ENST00000606690 900 ntTSL 516.15■□□□□ 0.181e-6■■■■□ 20.9
SFPQP23246 L3MBTL4-208ENST00000583809 549 ntTSL 425.34■■□□□ 1.651e-6■■■■□ 20.9
SFPQP23246 L3MBTL4-201ENST00000317931 3560 ntTSL 5 BASIC13.38□□□□□ -0.271e-6■■■■□ 20.9
SFPQP23246 L3MBTL4-206ENST00000581231 568 ntTSL 513.23□□□□□ -0.291e-6■■■■□ 20.9
SFPQP23246 L3MBTL4-202ENST00000400104 4534 ntTSL 1 (best) BASIC11.35□□□□□ -0.591e-6■■■■□ 20.9
SFPQP23246 DAZAP1-206ENST00000587833 560 ntTSL 511.55□□□□□ -0.561e-6■■■■□ 20.9
SFPQP23246 SHANK2-215ENST00000470759 762 ntTSL 520.94■□□□□ 0.944e-6■■■■□ 20.8
SFPQP23246 PTPRG-205ENST00000475527 2694 ntTSL 523.49■■□□□ 1.352e-6■■■■□ 20.8
SFPQP23246 GNAS-243ENST00000484504 662 ntTSL 231.05■■■□□ 2.565e-7■■■■□ 20.8
SFPQP23246 GNAS-244ENST00000485673 715 ntTSL 531.05■■■□□ 2.565e-7■■■■□ 20.8
SFPQP23246 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.73■■■□□ 2.514e-6■■■■□ 20.8
SFPQP23246 GNAS-256ENST00000603546 573 ntTSL 530.51■■■□□ 2.475e-7■■■■□ 20.8
SFPQP23246 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.27■■■□□ 2.444e-6■■■■□ 20.8
SFPQP23246 GNAS-235ENST00000478585 543 ntTSL 229.36■■■□□ 2.295e-7■■■■□ 20.8
SFPQP23246 GNAS-257ENST00000604005 693 ntTSL 329.36■■■□□ 2.295e-7■■■■□ 20.8
SFPQP23246 GNAS-228ENST00000469431 702 ntTSL 529.36■■■□□ 2.295e-7■■■■□ 20.8
SFPQP23246 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.145e-7■■■■□ 20.8
SFPQP23246 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.35■■■□□ 2.135e-7■■■■□ 20.8
SFPQP23246 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.35■■■□□ 2.135e-7■■■■□ 20.8
SFPQP23246 GNAS-229ENST00000470512 913 ntTSL 528.15■■■□□ 2.15e-7■■■■□ 20.8
SFPQP23246 GNAS-224ENST00000464960 986 ntTSL 228.05■■■□□ 2.085e-7■■■■□ 20.8
SFPQP23246 GNAS-237ENST00000480232 893 ntTSL 527.9■■■□□ 2.065e-7■■■■□ 20.8
SFPQP23246 GNAS-233ENST00000476935 828 ntTSL 326.54■■□□□ 1.845e-7■■■■□ 20.8
SFPQP23246 GNAS-234ENST00000477931 1663 ntTSL 1 (best)26.02■■□□□ 1.765e-7■■■■□ 20.8
SFPQP23246 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.635e-7■■■■□ 20.8
SFPQP23246 GNAS-248ENST00000488652 953 ntTSL 523.8■■□□□ 1.45e-7■■■■□ 20.8
SFPQP23246 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.294e-6■■■■□ 20.8
SFPQP23246 GNAS-240ENST00000481768 1903 ntTSL 1 (best)22.33■■□□□ 1.175e-7■■■■□ 20.8
SFPQP23246 AGAP3-209ENST00000469901 582 ntTSL 322.22■■□□□ 1.154e-6■■■■□ 20.8
SFPQP23246 GNAS-238ENST00000480975 1534 ntTSL 521.75■■□□□ 1.075e-7■■■■□ 20.8
SFPQP23246 GNAS-226ENST00000467321 733 ntTSL 521.18■□□□□ 0.985e-7■■■■□ 20.8
SFPQP23246 GNAS-220ENST00000461152 278 ntTSL 520.56■□□□□ 0.885e-7■■■■□ 20.8
SFPQP23246 GNAS-230ENST00000472183 911 ntTSL 320.2■□□□□ 0.825e-7■■■■□ 20.8
SFPQP23246 GNAS-250ENST00000491348 1068 ntTSL 320.2■□□□□ 0.825e-7■■■■□ 20.8
SFPQP23246 LRCH1-204ENST00000443945 2070 ntTSL 1 (best)20.09■□□□□ 0.815e-6■■■■□ 20.8
SFPQP23246 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.765e-6■■■■□ 20.8
SFPQP23246 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.465e-6■■■■□ 20.8
SFPQP23246 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.78■□□□□ 0.445e-7■■■■□ 20.8
SFPQP23246 GNAS-223ENST00000464788 583 ntTSL 217.67■□□□□ 0.425e-7■■■■□ 20.8
SFPQP23246 GNAS-249ENST00000490374 675 ntTSL 316.74■□□□□ 0.275e-7■■■■□ 20.8
SFPQP23246 AGAP3-221ENST00000490097 604 ntTSL 416.7■□□□□ 0.264e-6■■■■□ 20.8
SFPQP23246 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.53■□□□□ 0.245e-7■■■■□ 20.8
SFPQP23246 GNAS-222ENST00000464624 3764 ntTSL 516.23■□□□□ 0.195e-7■■■■□ 20.8
SFPQP23246 GNAS-221ENST00000462499 492 ntTSL 215.99■□□□□ 0.155e-7■■■■□ 20.8
SFPQP23246 GNAS-241ENST00000482112 704 ntTSL 315.99■□□□□ 0.155e-7■■■■□ 20.8
SFPQP23246 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC15.02■□□□□ -04e-6■■■■□ 20.8
SFPQP23246 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC14.95□□□□□ -0.025e-7■■■■□ 20.8
SFPQP23246 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.044e-6■■■■□ 20.8
SFPQP23246 GNAS-206ENST00000349036 581 ntTSL 514.7□□□□□ -0.065e-7■■■■□ 20.8
SFPQP23246 GNAS-219ENST00000453292 632 ntTSL 514.57□□□□□ -0.085e-7■■■■□ 20.8
SFPQP23246 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.115e-6■■■■□ 20.8
SFPQP23246 GNAS-209ENST00000371081 730 ntTSL 2 BASIC13.28□□□□□ -0.285e-7■■■■□ 20.8
SFPQP23246 GNAS-252ENST00000493744 812 ntTSL 213.12□□□□□ -0.315e-7■■■■□ 20.8
SFPQP23246 GNAS-239ENST00000481039 756 ntTSL 512.69□□□□□ -0.385e-7■■■■□ 20.8
SFPQP23246 GNAS-205ENST00000338783 641 ntTSL 312.6□□□□□ -0.395e-7■■■■□ 20.8
SFPQP23246 GNAS-217ENST00000423897 736 ntTSL 312.6□□□□□ -0.395e-7■■■■□ 20.8
SFPQP23246 GNAS-208ENST00000371075 2551 ntTSL 1 (best) BASIC12.31□□□□□ -0.445e-7■■■■□ 20.8
SFPQP23246 GNAS-247ENST00000488546 897 ntTSL 512.26□□□□□ -0.455e-7■■■■□ 20.8
SFPQP23246 GNAS-216ENST00000419558 729 ntTSL 312.04□□□□□ -0.485e-7■■■■□ 20.8
SFPQP23246 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC11.3□□□□□ -0.65e-7■■■■□ 20.8
SFPQP23246 GNAS-218ENST00000450130 595 ntTSL 510.3□□□□□ -0.765e-7■■■■□ 20.8
SFPQP23246 GNAS-225ENST00000467227 543 ntTSL 39.67□□□□□ -0.865e-7■■■■□ 20.8
SFPQP23246 GNAS-251ENST00000492907 790 ntTSL 39.34□□□□□ -0.915e-7■■■■□ 20.8
SFPQP23246 GNAS-227ENST00000468895 583 ntTSL 39.34□□□□□ -0.915e-7■■■■□ 20.8
SFPQP23246 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.56□□□□□ -1.525e-7■■■■□ 20.8
SFPQP23246 EZH2-210ENST00000498186 1876 ntTSL 227.47■■□□□ 1.993e-6■■■■□ 20.7
SFPQP23246 EZH2-207ENST00000483012 1491 ntTSL 227.44■■□□□ 1.983e-6■■■■□ 20.7
SFPQP23246 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.14■■□□□ 1.933e-6■■■■□ 20.7
SFPQP23246 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.65■■□□□ 1.863e-6■■■■□ 20.7
SFPQP23246 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.323e-6■■■■□ 20.7
SFPQP23246 EZH2-209ENST00000492143 3641 ntTSL 219.52■□□□□ 0.713e-6■■■■□ 20.7
SFPQP23246 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.033e-6■■■■□ 20.7
SFPQP23246 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.033e-6■■■■□ 20.7
SFPQP23246 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.631e-6■■■■□ 20.6
SFPQP23246 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.762e-6■■■■□ 20.6
SFPQP23246 ANP32A-201ENST00000267918 1084 ntTSL 316.67■□□□□ 0.263e-9■■■■□ 20.6
SFPQP23246 ANP32A-209ENST00000495764 504 ntTSL 515.74■□□□□ 0.113e-9■■■■□ 20.6
SFPQP23246 ANP32A-205ENST00000483221 420 ntTSL 315.74■□□□□ 0.113e-9■■■■□ 20.6
SFPQP23246 RAI1-203ENST00000471135 570 ntTSL 314.62□□□□□ -0.072e-6■■■■□ 20.6
SFPQP23246 NEK6-206ENST00000422297 799 ntTSL 315.81■□□□□ 0.122e-6■■■■□ 20.5
SFPQP23246 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC14.26□□□□□ -0.132e-6■■■■□ 20.5
SFPQP23246 NEK6-207ENST00000423785 726 ntTSL 513.82□□□□□ -0.22e-6■■■■□ 20.5
SFPQP23246 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC13.8□□□□□ -0.22e-6■■■■□ 20.5
SFPQP23246 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.652e-6■■■■□ 20.5
SFPQP23246 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.73■□□□□ 0.593e-6■■■■□ 20.5
SFPQP23246 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.151e-6■■■■□ 20.5
SFPQP23246 HOXA3-204ENST00000521401 598 ntTSL 324.05■■□□□ 1.441e-6■■■■□ 20.5
SFPQP23246 HOXA3-206ENST00000522788 581 ntTSL 324.05■■□□□ 1.441e-6■■■■□ 20.5
SFPQP23246 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.075e-7■■■■□ 20.5
SFPQP23246 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.035e-7■■■■□ 20.5
SFPQP23246 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.05■□□□□ 0.965e-7■■■■□ 20.5
SFPQP23246 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.645e-7■■■■□ 20.5
SFPQP23246 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.24■□□□□ 0.515e-7■■■■□ 20.5
SFPQP23246 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.51e-6■■■■□ 20.5
Retrieved 100 of 4,991 protein–RNA pairs in 110.8 ms