Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H1DP16402 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
HIST1H1DP16402 DUSP8P4-201ENST00000399538 1761 ntBASIC21.1■□□□□ 0.97
HIST1H1DP16402 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.1■□□□□ 0.97
HIST1H1DP16402 AC092803.2-201ENST00000564287 1899 ntBASIC21.1■□□□□ 0.97
HIST1H1DP16402 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H1DP16402 MIR6090-201ENST00000622481 60 ntBASIC21.09■□□□□ 0.97
HIST1H1DP16402 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.09■□□□□ 0.97
HIST1H1DP16402 AP004609.3-201ENST00000610705 1884 ntBASIC21.09■□□□□ 0.97
HIST1H1DP16402 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H1DP16402 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST1H1DP16402 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.96
HIST1H1DP16402 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H1DP16402 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H1DP16402 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HIST1H1DP16402 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.07■□□□□ 0.96
HIST1H1DP16402 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
HIST1H1DP16402 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
HIST1H1DP16402 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.06■□□□□ 0.96
HIST1H1DP16402 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.06■□□□□ 0.96
HIST1H1DP16402 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H1DP16402 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.06■□□□□ 0.96
HIST1H1DP16402 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H1DP16402 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H1DP16402 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H1DP16402 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HIST1H1DP16402 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H1DP16402 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H1DP16402 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.05■□□□□ 0.96
HIST1H1DP16402 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H1DP16402 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H1DP16402 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H1DP16402 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H1DP16402 SUZ12P1-203ENST00000578195 985 ntBASIC21.04■□□□□ 0.96
HIST1H1DP16402 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H1DP16402 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H1DP16402 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HIST1H1DP16402 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H1DP16402 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H1DP16402 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1DP16402 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1DP16402 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1DP16402 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1DP16402 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1DP16402 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1DP16402 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H1DP16402 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HIST1H1DP16402 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HIST1H1DP16402 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HIST1H1DP16402 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HIST1H1DP16402 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.01■□□□□ 0.95
HIST1H1DP16402 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.01■□□□□ 0.95
HIST1H1DP16402 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21■□□□□ 0.95
HIST1H1DP16402 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21■□□□□ 0.95
HIST1H1DP16402 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HIST1H1DP16402 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H1DP16402 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HIST1H1DP16402 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H1DP16402 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H1DP16402 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H1DP16402 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.98■□□□□ 0.95
HIST1H1DP16402 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H1DP16402 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.98■□□□□ 0.95
HIST1H1DP16402 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.98■□□□□ 0.95
HIST1H1DP16402 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H1DP16402 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H1DP16402 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.98■□□□□ 0.95
HIST1H1DP16402 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HIST1H1DP16402 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1DP16402 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.97■□□□□ 0.95
HIST1H1DP16402 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1DP16402 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1DP16402 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.97■□□□□ 0.95
HIST1H1DP16402 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.97■□□□□ 0.95
HIST1H1DP16402 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H1DP16402 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
HIST1H1DP16402 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.97■□□□□ 0.95
HIST1H1DP16402 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1DP16402 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1DP16402 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1DP16402 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1DP16402 AC142472.1-201ENST00000612013 1741 ntBASIC20.96■□□□□ 0.95
HIST1H1DP16402 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1DP16402 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.96■□□□□ 0.95
HIST1H1DP16402 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.96■□□□□ 0.95
HIST1H1DP16402 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1DP16402 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
HIST1H1DP16402 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
HIST1H1DP16402 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H1DP16402 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.95■□□□□ 0.94
HIST1H1DP16402 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST1H1DP16402 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST1H1DP16402 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.95■□□□□ 0.94
HIST1H1DP16402 DUX4L28-201ENST00000623687 678 ntBASIC20.95■□□□□ 0.94
HIST1H1DP16402 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.94■□□□□ 0.94
HIST1H1DP16402 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H1DP16402 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H1DP16402 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HIST1H1DP16402 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H1DP16402 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms