Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.05■■□□□ 1.44
KRT6AP02538 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.05■■□□□ 1.44
KRT6AP02538 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
KRT6AP02538 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.05■■□□□ 1.44
KRT6AP02538 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
KRT6AP02538 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
KRT6AP02538 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
KRT6AP02538 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KRT6AP02538 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
KRT6AP02538 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.03■■□□□ 1.44
KRT6AP02538 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KRT6AP02538 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.03■■□□□ 1.44
KRT6AP02538 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.03■■□□□ 1.44
KRT6AP02538 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.03■■□□□ 1.44
KRT6AP02538 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
KRT6AP02538 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
KRT6AP02538 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
KRT6AP02538 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.01■■□□□ 1.43
KRT6AP02538 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.01■■□□□ 1.43
KRT6AP02538 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
KRT6AP02538 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KRT6AP02538 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24■■□□□ 1.43
KRT6AP02538 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24■■□□□ 1.43
KRT6AP02538 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24■■□□□ 1.43
KRT6AP02538 LINC01971-201ENST00000617888 1048 ntBASIC24■■□□□ 1.43
KRT6AP02538 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24■■□□□ 1.43
KRT6AP02538 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
KRT6AP02538 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24■■□□□ 1.43
KRT6AP02538 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24■■□□□ 1.43
KRT6AP02538 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.99■■□□□ 1.43
KRT6AP02538 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
KRT6AP02538 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.99■■□□□ 1.43
KRT6AP02538 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KRT6AP02538 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KRT6AP02538 AL449106.1-201ENST00000608517 1980 ntBASIC23.98■■□□□ 1.43
KRT6AP02538 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT6AP02538 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.98■■□□□ 1.43
KRT6AP02538 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.98■■□□□ 1.43
KRT6AP02538 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
KRT6AP02538 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT6AP02538 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
KRT6AP02538 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT6AP02538 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
KRT6AP02538 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KRT6AP02538 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KRT6AP02538 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.96■■□□□ 1.43
KRT6AP02538 AC135731.1-201ENST00000569415 2548 ntBASIC23.95■■□□□ 1.43
KRT6AP02538 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
KRT6AP02538 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
KRT6AP02538 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KRT6AP02538 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.94■■□□□ 1.42
KRT6AP02538 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.94■■□□□ 1.42
KRT6AP02538 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.94■■□□□ 1.42
KRT6AP02538 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT6AP02538 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT6AP02538 AP004609.3-201ENST00000610705 1884 ntBASIC23.94■■□□□ 1.42
KRT6AP02538 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRT6AP02538 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KRT6AP02538 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.93■■□□□ 1.42
KRT6AP02538 WHAMMP3-201ENST00000611636 1609 ntBASIC23.93■■□□□ 1.42
KRT6AP02538 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRT6AP02538 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
KRT6AP02538 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
KRT6AP02538 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.92■■□□□ 1.42
KRT6AP02538 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KRT6AP02538 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT6AP02538 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT6AP02538 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.91■■□□□ 1.42
KRT6AP02538 DUX4L13-201ENST00000554103 1267 ntBASIC23.91■■□□□ 1.42
KRT6AP02538 DUX4L15-201ENST00000611059 1267 ntBASIC23.91■■□□□ 1.42
KRT6AP02538 DUX4L23-201ENST00000615195 1269 ntBASIC23.91■■□□□ 1.42
KRT6AP02538 DUX4L24-201ENST00000617576 1269 ntBASIC23.91■■□□□ 1.42
KRT6AP02538 DUX4L22-201ENST00000618238 1269 ntBASIC23.91■■□□□ 1.42
KRT6AP02538 DUX4L20-201ENST00000619712 1269 ntBASIC23.91■■□□□ 1.42
KRT6AP02538 DUX4L21-201ENST00000622058 1269 ntBASIC23.91■■□□□ 1.42
KRT6AP02538 DUX4L10-201ENST00000622460 1267 ntBASIC23.91■■□□□ 1.42
KRT6AP02538 DUX4L25-201ENST00000624915 1269 ntBASIC23.91■■□□□ 1.42
KRT6AP02538 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.91■■□□□ 1.42
KRT6AP02538 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT6AP02538 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
KRT6AP02538 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.9■■□□□ 1.42
KRT6AP02538 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.89■■□□□ 1.42
KRT6AP02538 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT6AP02538 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
KRT6AP02538 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
KRT6AP02538 AC091060.1-201ENST00000623524 1766 ntBASIC23.86■■□□□ 1.41
KRT6AP02538 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT6AP02538 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT6AP02538 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.86■■□□□ 1.41
KRT6AP02538 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.86■■□□□ 1.41
KRT6AP02538 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT6AP02538 AC142472.1-201ENST00000612013 1741 ntBASIC23.86■■□□□ 1.41
KRT6AP02538 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT6AP02538 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT6AP02538 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.86■■□□□ 1.41
KRT6AP02538 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
KRT6AP02538 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT6AP02538 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.85■■□□□ 1.41
KRT6AP02538 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT6AP02538 DUX4L11-201ENST00000611504 1267 ntBASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms