Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.31■■□□□ 1.16
CLDN1O95832 BHLHE23-202ENST00000612929 1109 ntBASIC22.31■■□□□ 1.16
CLDN1O95832 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN1O95832 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN1O95832 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.3■■□□□ 1.16
CLDN1O95832 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.3■■□□□ 1.16
CLDN1O95832 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN1O95832 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN1O95832 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN1O95832 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN1O95832 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.29■■□□□ 1.16
CLDN1O95832 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CLDN1O95832 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN1O95832 GUSBP5-201ENST00000418136 578 ntBASIC22.28■■□□□ 1.16
CLDN1O95832 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN1O95832 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN1O95832 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.27■■□□□ 1.16
CLDN1O95832 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN1O95832 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN1O95832 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN1O95832 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CLDN1O95832 DUX4L9-201ENST00000449051 1259 ntBASIC22.26■■□□□ 1.15
CLDN1O95832 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.26■■□□□ 1.15
CLDN1O95832 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.26■■□□□ 1.15
CLDN1O95832 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN1O95832 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN1O95832 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN1O95832 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN1O95832 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN1O95832 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.25■■□□□ 1.15
CLDN1O95832 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLDN1O95832 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
CLDN1O95832 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLDN1O95832 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.24■■□□□ 1.15
CLDN1O95832 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
CLDN1O95832 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLDN1O95832 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLDN1O95832 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.24■■□□□ 1.15
CLDN1O95832 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CLDN1O95832 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN1O95832 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN1O95832 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN1O95832 AC026202.3-201ENST00000600805 1127 ntBASIC22.23■■□□□ 1.15
CLDN1O95832 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN1O95832 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN1O95832 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CLDN1O95832 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.23■■□□□ 1.15
CLDN1O95832 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN1O95832 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLDN1O95832 AC103834.1-201ENST00000520383 144 ntBASIC22.22■■□□□ 1.15
CLDN1O95832 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLDN1O95832 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.22■■□□□ 1.15
CLDN1O95832 ABCB10P1-201ENST00000614297 2181 ntBASIC22.21■■□□□ 1.15
CLDN1O95832 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLDN1O95832 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.21■■□□□ 1.15
CLDN1O95832 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.21■■□□□ 1.15
CLDN1O95832 YBX1P4-201ENST00000392794 808 ntBASIC22.21■■□□□ 1.15
CLDN1O95832 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.21■■□□□ 1.15
CLDN1O95832 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLDN1O95832 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
CLDN1O95832 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
CLDN1O95832 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.21■■□□□ 1.15
CLDN1O95832 AC074183.2-201ENST00000623112 922 ntBASIC22.21■■□□□ 1.15
CLDN1O95832 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CLDN1O95832 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
CLDN1O95832 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLDN1O95832 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLDN1O95832 SMPD5-203ENST00000639008 1464 ntBASIC22.2■■□□□ 1.14
CLDN1O95832 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN1O95832 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CLDN1O95832 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.19■■□□□ 1.14
CLDN1O95832 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.19■■□□□ 1.14
CLDN1O95832 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN1O95832 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLDN1O95832 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.18■■□□□ 1.14
CLDN1O95832 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLDN1O95832 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.18■■□□□ 1.14
CLDN1O95832 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLDN1O95832 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CLDN1O95832 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.17■■□□□ 1.14
CLDN1O95832 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.17■■□□□ 1.14
CLDN1O95832 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CLDN1O95832 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.17■■□□□ 1.14
CLDN1O95832 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CLDN1O95832 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.17■■□□□ 1.14
CLDN1O95832 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN1O95832 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN1O95832 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN1O95832 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN1O95832 AL356441.2-201ENST00000443009 864 ntBASIC22.16■■□□□ 1.14
CLDN1O95832 SPCS2P3-201ENST00000500401 656 ntBASIC22.16■■□□□ 1.14
CLDN1O95832 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CLDN1O95832 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN1O95832 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.15■■□□□ 1.14
CLDN1O95832 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN1O95832 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN1O95832 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN1O95832 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CLDN1O95832 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.14■■□□□ 1.13
CLDN1O95832 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms