Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE6DO43924 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6DO43924 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.28■□□□□ 0.68
PDE6DO43924 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6DO43924 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6DO43924 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6DO43924 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.27■□□□□ 0.68
PDE6DO43924 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6DO43924 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6DO43924 ZNRF2P1-201ENST00000441407 443 ntBASIC19.27■□□□□ 0.68
PDE6DO43924 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.27■□□□□ 0.68
PDE6DO43924 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
PDE6DO43924 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6DO43924 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6DO43924 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6DO43924 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6DO43924 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDE6DO43924 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6DO43924 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6DO43924 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6DO43924 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6DO43924 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6DO43924 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PDE6DO43924 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6DO43924 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6DO43924 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6DO43924 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.24■□□□□ 0.67
PDE6DO43924 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6DO43924 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.24■□□□□ 0.67
PDE6DO43924 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDE6DO43924 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PDE6DO43924 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PDE6DO43924 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PDE6DO43924 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6DO43924 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDE6DO43924 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6DO43924 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
PDE6DO43924 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PDE6DO43924 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.21■□□□□ 0.67
PDE6DO43924 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6DO43924 ERN1-208ENST00000606895 2068 ntBASIC19.21■□□□□ 0.67
PDE6DO43924 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6DO43924 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDE6DO43924 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6DO43924 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.2■□□□□ 0.66
PDE6DO43924 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.2■□□□□ 0.66
PDE6DO43924 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6DO43924 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6DO43924 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDE6DO43924 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6DO43924 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDE6DO43924 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PDE6DO43924 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PDE6DO43924 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6DO43924 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6DO43924 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.18■□□□□ 0.66
PDE6DO43924 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6DO43924 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6DO43924 AL133380.1-201ENST00000506013 324 ntBASIC19.17■□□□□ 0.66
PDE6DO43924 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6DO43924 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6DO43924 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6DO43924 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6DO43924 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6DO43924 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6DO43924 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6DO43924 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6DO43924 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6DO43924 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6DO43924 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE6DO43924 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDE6DO43924 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6DO43924 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6DO43924 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6DO43924 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6DO43924 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PDE6DO43924 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.13■□□□□ 0.65
PDE6DO43924 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE6DO43924 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PDE6DO43924 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.13■□□□□ 0.65
PDE6DO43924 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PDE6DO43924 AP004609.3-201ENST00000610705 1884 ntBASIC19.13■□□□□ 0.65
PDE6DO43924 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PDE6DO43924 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6DO43924 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE6DO43924 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6DO43924 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.12■□□□□ 0.65
PDE6DO43924 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6DO43924 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6DO43924 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6DO43924 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6DO43924 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6DO43924 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE6DO43924 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDE6DO43924 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6DO43924 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PDE6DO43924 AC142381.3-201ENST00000568208 1670 ntBASIC19.11■□□□□ 0.65
PDE6DO43924 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6DO43924 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6DO43924 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms