Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.3■□□□□ 0.84
DUXBA0A1W2PPF3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DUXBA0A1W2PPF3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.29■□□□□ 0.84
DUXBA0A1W2PPF3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DUXBA0A1W2PPF3 AP004609.3-201ENST00000610705 1884 ntBASIC20.29■□□□□ 0.84
DUXBA0A1W2PPF3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.29■□□□□ 0.84
DUXBA0A1W2PPF3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
DUXBA0A1W2PPF3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DUXBA0A1W2PPF3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DUXBA0A1W2PPF3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DUXBA0A1W2PPF3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.29■□□□□ 0.84
DUXBA0A1W2PPF3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DUXBA0A1W2PPF3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DUXBA0A1W2PPF3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.28■□□□□ 0.84
DUXBA0A1W2PPF3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.28■□□□□ 0.84
DUXBA0A1W2PPF3 WHAMMP2-203ENST00000563942 1603 ntBASIC20.27■□□□□ 0.84
DUXBA0A1W2PPF3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DUXBA0A1W2PPF3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DUXBA0A1W2PPF3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
DUXBA0A1W2PPF3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
DUXBA0A1W2PPF3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
DUXBA0A1W2PPF3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DUXBA0A1W2PPF3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DUXBA0A1W2PPF3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.26■□□□□ 0.83
DUXBA0A1W2PPF3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUXBA0A1W2PPF3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.25■□□□□ 0.83
DUXBA0A1W2PPF3 CAHM-201ENST00000604200 896 ntBASIC20.25■□□□□ 0.83
DUXBA0A1W2PPF3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUXBA0A1W2PPF3 AC093323.1-202ENST00000635031 2045 ntBASIC20.25■□□□□ 0.83
DUXBA0A1W2PPF3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.25■□□□□ 0.83
DUXBA0A1W2PPF3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUXBA0A1W2PPF3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DUXBA0A1W2PPF3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUXBA0A1W2PPF3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUXBA0A1W2PPF3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DUXBA0A1W2PPF3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.24■□□□□ 0.83
DUXBA0A1W2PPF3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DUXBA0A1W2PPF3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DUXBA0A1W2PPF3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DUXBA0A1W2PPF3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
DUXBA0A1W2PPF3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DUXBA0A1W2PPF3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
DUXBA0A1W2PPF3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DUXBA0A1W2PPF3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.24■□□□□ 0.83
DUXBA0A1W2PPF3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
DUXBA0A1W2PPF3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DUXBA0A1W2PPF3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.23■□□□□ 0.83
DUXBA0A1W2PPF3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DUXBA0A1W2PPF3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DUXBA0A1W2PPF3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.23■□□□□ 0.83
DUXBA0A1W2PPF3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
DUXBA0A1W2PPF3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.22■□□□□ 0.83
DUXBA0A1W2PPF3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.22■□□□□ 0.83
DUXBA0A1W2PPF3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
DUXBA0A1W2PPF3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.22■□□□□ 0.83
DUXBA0A1W2PPF3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DUXBA0A1W2PPF3 LINC00273-201ENST00000539813 1452 ntBASIC20.22■□□□□ 0.83
DUXBA0A1W2PPF3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.22■□□□□ 0.83
DUXBA0A1W2PPF3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DUXBA0A1W2PPF3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DUXBA0A1W2PPF3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.21■□□□□ 0.83
DUXBA0A1W2PPF3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DUXBA0A1W2PPF3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DUXBA0A1W2PPF3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DUXBA0A1W2PPF3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
DUXBA0A1W2PPF3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.21■□□□□ 0.83
DUXBA0A1W2PPF3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DUXBA0A1W2PPF3 AC142472.1-201ENST00000612013 1741 ntBASIC20.21■□□□□ 0.83
DUXBA0A1W2PPF3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DUXBA0A1W2PPF3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DUXBA0A1W2PPF3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
DUXBA0A1W2PPF3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DUXBA0A1W2PPF3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DUXBA0A1W2PPF3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DUXBA0A1W2PPF3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DUXBA0A1W2PPF3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.19■□□□□ 0.82
DUXBA0A1W2PPF3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DUXBA0A1W2PPF3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DUXBA0A1W2PPF3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DUXBA0A1W2PPF3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
DUXBA0A1W2PPF3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DUXBA0A1W2PPF3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DUXBA0A1W2PPF3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DUXBA0A1W2PPF3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DUXBA0A1W2PPF3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DUXBA0A1W2PPF3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DUXBA0A1W2PPF3 MIR762-201ENST00000390236 83 ntBASIC20.16■□□□□ 0.82
DUXBA0A1W2PPF3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
DUXBA0A1W2PPF3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DUXBA0A1W2PPF3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.16■□□□□ 0.82
DUXBA0A1W2PPF3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
DUXBA0A1W2PPF3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DUXBA0A1W2PPF3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DUXBA0A1W2PPF3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
DUXBA0A1W2PPF3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DUXBA0A1W2PPF3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DUXBA0A1W2PPF3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DUXBA0A1W2PPF3 AC108673.1-201ENST00000510422 1159 ntBASIC20.14■□□□□ 0.81
DUXBA0A1W2PPF3 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.14■□□□□ 0.81
DUXBA0A1W2PPF3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms