Protein–RNA interactions for Protein: A0A0K0K1B3

TRBV30, T-cell receptor beta variable 30 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV30A0A0K0K1B3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV30A0A0K0K1B3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRBV30A0A0K0K1B3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV30A0A0K0K1B3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV30A0A0K0K1B3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV30A0A0K0K1B3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV30A0A0K0K1B3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRBV30A0A0K0K1B3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV30A0A0K0K1B3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV30A0A0K0K1B3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV30A0A0K0K1B3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV30A0A0K0K1B3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBV30A0A0K0K1B3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV30A0A0K0K1B3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBV30A0A0K0K1B3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV30A0A0K0K1B3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV30A0A0K0K1B3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV30A0A0K0K1B3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRBV30A0A0K0K1B3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV30A0A0K0K1B3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV30A0A0K0K1B3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV30A0A0K0K1B3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRBV30A0A0K0K1B3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV30A0A0K0K1B3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV30A0A0K0K1B3 MIR762-201ENST00000390236 83 ntBASIC16.78■□□□□ 0.28
TRBV30A0A0K0K1B3 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.78■□□□□ 0.28
TRBV30A0A0K0K1B3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRBV30A0A0K0K1B3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV30A0A0K0K1B3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV30A0A0K0K1B3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV30A0A0K0K1B3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV30A0A0K0K1B3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV30A0A0K0K1B3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV30A0A0K0K1B3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV30A0A0K0K1B3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV30A0A0K0K1B3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV30A0A0K0K1B3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV30A0A0K0K1B3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV30A0A0K0K1B3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV30A0A0K0K1B3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV30A0A0K0K1B3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV30A0A0K0K1B3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV30A0A0K0K1B3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV30A0A0K0K1B3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV30A0A0K0K1B3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRBV30A0A0K0K1B3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TRBV30A0A0K0K1B3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRBV30A0A0K0K1B3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV30A0A0K0K1B3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRBV30A0A0K0K1B3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV30A0A0K0K1B3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV30A0A0K0K1B3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV30A0A0K0K1B3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV30A0A0K0K1B3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV30A0A0K0K1B3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV30A0A0K0K1B3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV30A0A0K0K1B3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV30A0A0K0K1B3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV30A0A0K0K1B3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV30A0A0K0K1B3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.73■□□□□ 0.27
TRBV30A0A0K0K1B3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV30A0A0K0K1B3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV30A0A0K0K1B3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV30A0A0K0K1B3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV30A0A0K0K1B3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV30A0A0K0K1B3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV30A0A0K0K1B3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV30A0A0K0K1B3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV30A0A0K0K1B3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV30A0A0K0K1B3 AC012676.1-201ENST00000574705 1949 ntBASIC16.71■□□□□ 0.27
TRBV30A0A0K0K1B3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV30A0A0K0K1B3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV30A0A0K0K1B3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV30A0A0K0K1B3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV30A0A0K0K1B3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV30A0A0K0K1B3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.7■□□□□ 0.26
TRBV30A0A0K0K1B3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV30A0A0K0K1B3 AC005559.1-201ENST00000589661 871 ntBASIC16.7■□□□□ 0.26
TRBV30A0A0K0K1B3 AC100797.4-201ENST00000631653 1827 ntBASIC16.7■□□□□ 0.26
TRBV30A0A0K0K1B3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV30A0A0K0K1B3 AP002414.2-202ENST00000590929 1450 ntBASIC16.69■□□□□ 0.26
TRBV30A0A0K0K1B3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TRBV30A0A0K0K1B3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV30A0A0K0K1B3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRBV30A0A0K0K1B3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV30A0A0K0K1B3 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.68■□□□□ 0.26
TRBV30A0A0K0K1B3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV30A0A0K0K1B3 LINC00543-201ENST00000567234 1845 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms