Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 AC133552.2-201ENST00000619106 1032 ntBASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.81■■□□□ 1.24
TRAV17A0A0B4J275 AP002414.2-202ENST00000590929 1450 ntBASIC22.81■■□□□ 1.24
TRAV17A0A0B4J275 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.81■■□□□ 1.24
TRAV17A0A0B4J275 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.8■■□□□ 1.24
TRAV17A0A0B4J275 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRAV17A0A0B4J275 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.8■■□□□ 1.24
TRAV17A0A0B4J275 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRAV17A0A0B4J275 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRAV17A0A0B4J275 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
TRAV17A0A0B4J275 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.79■■□□□ 1.24
TRAV17A0A0B4J275 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRAV17A0A0B4J275 AC009831.1-201ENST00000580420 1582 ntBASIC22.79■■□□□ 1.24
TRAV17A0A0B4J275 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRAV17A0A0B4J275 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAV17A0A0B4J275 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAV17A0A0B4J275 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAV17A0A0B4J275 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
TRAV17A0A0B4J275 AL592293.1-201ENST00000502889 1188 ntBASIC22.78■■□□□ 1.24
TRAV17A0A0B4J275 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.78■■□□□ 1.24
TRAV17A0A0B4J275 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.77■■□□□ 1.24
TRAV17A0A0B4J275 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV17A0A0B4J275 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV17A0A0B4J275 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.77■■□□□ 1.24
TRAV17A0A0B4J275 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.77■■□□□ 1.24
TRAV17A0A0B4J275 AC025884.2-201ENST00000553429 711 ntBASIC22.77■■□□□ 1.24
TRAV17A0A0B4J275 AC129492.7-201ENST00000622992 756 ntBASIC22.77■■□□□ 1.24
TRAV17A0A0B4J275 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV17A0A0B4J275 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
TRAV17A0A0B4J275 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV17A0A0B4J275 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV17A0A0B4J275 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.76■■□□□ 1.23
TRAV17A0A0B4J275 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV17A0A0B4J275 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
TRAV17A0A0B4J275 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
TRAV17A0A0B4J275 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
TRAV17A0A0B4J275 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV17A0A0B4J275 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV17A0A0B4J275 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
TRAV17A0A0B4J275 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
TRAV17A0A0B4J275 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV17A0A0B4J275 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
TRAV17A0A0B4J275 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
TRAV17A0A0B4J275 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRAV17A0A0B4J275 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRAV17A0A0B4J275 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TRAV17A0A0B4J275 RP9P-202ENST00000450133 1212 ntBASIC22.74■■□□□ 1.23
TRAV17A0A0B4J275 AC026202.3-201ENST00000600805 1127 ntBASIC22.74■■□□□ 1.23
TRAV17A0A0B4J275 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
TRAV17A0A0B4J275 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.74■■□□□ 1.23
TRAV17A0A0B4J275 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRAV17A0A0B4J275 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
TRAV17A0A0B4J275 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.73■■□□□ 1.23
TRAV17A0A0B4J275 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.73■■□□□ 1.23
TRAV17A0A0B4J275 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
TRAV17A0A0B4J275 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV17A0A0B4J275 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV17A0A0B4J275 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV17A0A0B4J275 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
TRAV17A0A0B4J275 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV17A0A0B4J275 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRAV17A0A0B4J275 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRAV17A0A0B4J275 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.7■■□□□ 1.22
TRAV17A0A0B4J275 MIR3960-201ENST00000583311 91 ntBASIC22.7■■□□□ 1.22
TRAV17A0A0B4J275 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.7■■□□□ 1.22
TRAV17A0A0B4J275 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.7■■□□□ 1.22
TRAV17A0A0B4J275 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.7■■□□□ 1.22
TRAV17A0A0B4J275 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.7■■□□□ 1.22
TRAV17A0A0B4J275 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRAV17A0A0B4J275 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRAV17A0A0B4J275 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.7■■□□□ 1.22
TRAV17A0A0B4J275 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV17A0A0B4J275 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV17A0A0B4J275 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.69■■□□□ 1.22
TRAV17A0A0B4J275 DUX4L18-201ENST00000553347 1267 ntBASIC22.69■■□□□ 1.22
TRAV17A0A0B4J275 AC093536.1-201ENST00000569153 554 ntBASIC22.69■■□□□ 1.22
TRAV17A0A0B4J275 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV17A0A0B4J275 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.68■■□□□ 1.22
TRAV17A0A0B4J275 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.68■■□□□ 1.22
TRAV17A0A0B4J275 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRAV17A0A0B4J275 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRAV17A0A0B4J275 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.67■■□□□ 1.22
TRAV17A0A0B4J275 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.67■■□□□ 1.22
TRAV17A0A0B4J275 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRAV17A0A0B4J275 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRAV17A0A0B4J275 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRAV17A0A0B4J275 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.66■■□□□ 1.22
TRAV17A0A0B4J275 RARRES2P1-201ENST00000474487 481 ntBASIC22.66■■□□□ 1.22
TRAV17A0A0B4J275 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.66■■□□□ 1.22
TRAV17A0A0B4J275 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TRAV17A0A0B4J275 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.65■■□□□ 1.22
TRAV17A0A0B4J275 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRAV17A0A0B4J275 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
TRAV17A0A0B4J275 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TRAV17A0A0B4J275 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRAV17A0A0B4J275 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRAV17A0A0B4J275 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRAV17A0A0B4J275 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms