Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV7-1A0A0A6YYK4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV7-1A0A0A6YYK4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV7-1A0A0A6YYK4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV7-1A0A0A6YYK4 MIR3648-2-201ENST00000581792 180 ntBASIC19.37■□□□□ 0.69
TRBV7-1A0A0A6YYK4 MIR7108-201ENST00000614319 87 ntBASIC19.37■□□□□ 0.69
TRBV7-1A0A0A6YYK4 MIR3648-1-201ENST00000615959 180 ntBASIC19.37■□□□□ 0.69
TRBV7-1A0A0A6YYK4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.37■□□□□ 0.69
TRBV7-1A0A0A6YYK4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV7-1A0A0A6YYK4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV7-1A0A0A6YYK4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV7-1A0A0A6YYK4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV7-1A0A0A6YYK4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV7-1A0A0A6YYK4 AC148477.6-201ENST00000623746 465 ntBASIC19.36■□□□□ 0.69
TRBV7-1A0A0A6YYK4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV7-1A0A0A6YYK4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRBV7-1A0A0A6YYK4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV7-1A0A0A6YYK4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV7-1A0A0A6YYK4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRBV7-1A0A0A6YYK4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRBV7-1A0A0A6YYK4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.34■□□□□ 0.69
TRBV7-1A0A0A6YYK4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.34■□□□□ 0.69
TRBV7-1A0A0A6YYK4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
TRBV7-1A0A0A6YYK4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TRBV7-1A0A0A6YYK4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV7-1A0A0A6YYK4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV7-1A0A0A6YYK4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
TRBV7-1A0A0A6YYK4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV7-1A0A0A6YYK4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV7-1A0A0A6YYK4 WHAMMP3-201ENST00000611636 1609 ntBASIC19.32■□□□□ 0.68
TRBV7-1A0A0A6YYK4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV7-1A0A0A6YYK4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV7-1A0A0A6YYK4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRBV7-1A0A0A6YYK4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV7-1A0A0A6YYK4 MIR219A2-201ENST00000608502 1504 ntBASIC19.31■□□□□ 0.68
TRBV7-1A0A0A6YYK4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV7-1A0A0A6YYK4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV7-1A0A0A6YYK4 AC016575.1-201ENST00000607026 382 ntBASIC19.31■□□□□ 0.68
TRBV7-1A0A0A6YYK4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV7-1A0A0A6YYK4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV7-1A0A0A6YYK4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRBV7-1A0A0A6YYK4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.31■□□□□ 0.68
TRBV7-1A0A0A6YYK4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
TRBV7-1A0A0A6YYK4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV7-1A0A0A6YYK4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV7-1A0A0A6YYK4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV7-1A0A0A6YYK4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.3■□□□□ 0.68
TRBV7-1A0A0A6YYK4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRBV7-1A0A0A6YYK4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV7-1A0A0A6YYK4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV7-1A0A0A6YYK4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.29■□□□□ 0.68
TRBV7-1A0A0A6YYK4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV7-1A0A0A6YYK4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV7-1A0A0A6YYK4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TRBV7-1A0A0A6YYK4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV7-1A0A0A6YYK4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TRBV7-1A0A0A6YYK4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV7-1A0A0A6YYK4 HLA-V-202ENST00000446817 847 ntBASIC19.28■□□□□ 0.68
TRBV7-1A0A0A6YYK4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
TRBV7-1A0A0A6YYK4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.27■□□□□ 0.68
TRBV7-1A0A0A6YYK4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV7-1A0A0A6YYK4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV7-1A0A0A6YYK4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.27■□□□□ 0.68
TRBV7-1A0A0A6YYK4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.27■□□□□ 0.68
TRBV7-1A0A0A6YYK4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV7-1A0A0A6YYK4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV7-1A0A0A6YYK4 AL449106.1-201ENST00000608517 1980 ntBASIC19.26■□□□□ 0.67
TRBV7-1A0A0A6YYK4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV7-1A0A0A6YYK4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV7-1A0A0A6YYK4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV7-1A0A0A6YYK4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TRBV7-1A0A0A6YYK4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.26■□□□□ 0.67
TRBV7-1A0A0A6YYK4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.26■□□□□ 0.67
TRBV7-1A0A0A6YYK4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV7-1A0A0A6YYK4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV7-1A0A0A6YYK4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV7-1A0A0A6YYK4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRBV7-1A0A0A6YYK4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TRBV7-1A0A0A6YYK4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV7-1A0A0A6YYK4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV7-1A0A0A6YYK4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRBV7-1A0A0A6YYK4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRBV7-1A0A0A6YYK4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV7-1A0A0A6YYK4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV7-1A0A0A6YYK4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRBV7-1A0A0A6YYK4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV7-1A0A0A6YYK4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV7-1A0A0A6YYK4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms