Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAPPC1Q9Y5R8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 BX842568.3-201ENST00000418104 571 ntBASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 AC239859.2-201ENST00000444165 318 ntBASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 PCDHA1-201ENST00000378133 2726 ntBASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC1Q9Y5R8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 SLC7A5P2-201ENST00000553010 536 ntBASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 AC103702.1-201ENST00000548801 2630 ntBASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 KRT87P-202ENST00000534226 1464 ntBASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 AC018553.1-201ENST00000616682 1458 ntBASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC1Q9Y5R8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC1Q9Y5R8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms