Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
CHMP6Q96FZ7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CHMP6Q96FZ7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CHMP6Q96FZ7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.58■□□□□ 0.57
CHMP6Q96FZ7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CHMP6Q96FZ7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.58■□□□□ 0.57
CHMP6Q96FZ7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CHMP6Q96FZ7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CHMP6Q96FZ7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CHMP6Q96FZ7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP6Q96FZ7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP6Q96FZ7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 RAP2CP1-201ENST00000605103 478 ntBASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 AL139384.1-201ENST00000612143 3047 ntBASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP6Q96FZ7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 AP006587.1-201ENST00000534129 1502 ntBASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 AC112777.1-201ENST00000540175 1423 ntBASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.57■□□□□ 0.56
CHMP6Q96FZ7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 GPX1P1-201ENST00000388829 606 ntBASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 MIPEPP3-201ENST00000412105 444 ntBASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP6Q96FZ7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms