Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 MIR3917-201ENST00000580971 93 ntBASIC19.53■□□□□ 0.72
UBA3Q8TBC4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 KRT18P38-201ENST00000449496 1282 ntBASIC19.52■□□□□ 0.72
UBA3Q8TBC4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 AC073592.3-201ENST00000625118 1834 ntBASIC19.52■□□□□ 0.72
UBA3Q8TBC4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBA3Q8TBC4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.52■□□□□ 0.71
UBA3Q8TBC4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
UBA3Q8TBC4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
UBA3Q8TBC4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBA3Q8TBC4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBA3Q8TBC4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.52■□□□□ 0.71
UBA3Q8TBC4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
UBA3Q8TBC4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBA3Q8TBC4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 AC090164.3-201ENST00000610780 2143 ntBASIC19.51■□□□□ 0.71
UBA3Q8TBC4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 SPDYE15P-201ENST00000424157 909 ntBASIC19.51■□□□□ 0.71
UBA3Q8TBC4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.51■□□□□ 0.71
UBA3Q8TBC4 AL359075.1-203ENST00000462729 1002 ntBASIC19.51■□□□□ 0.71
UBA3Q8TBC4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBA3Q8TBC4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
UBA3Q8TBC4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms