Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 AL049597.2-201ENST00000565575 961 ntBASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 AL031432.5-201ENST00000641059 760 ntBASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CCDC146Q8IYE0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 MYC-208ENST00000641036 567 ntBASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC146Q8IYE0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 ESPNP-201ENST00000270691 2015 ntBASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC146Q8IYE0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
CCDC146Q8IYE0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 STARP1-201ENST00000397973 869 ntBASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 AC092647.4-201ENST00000457211 535 ntBASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 NTF6B-201ENST00000591913 560 ntBASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC146Q8IYE0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms