Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 AL499627.1-201ENST00000569373 2188 ntBASIC18.82■□□□□ 0.6
MT-ND3P03897 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MT-ND3P03897 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.82■□□□□ 0.6
MT-ND3P03897 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MT-ND3P03897 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.82■□□□□ 0.6
MT-ND3P03897 FAM210CP-201ENST00000445714 574 ntBASIC18.82■□□□□ 0.6
MT-ND3P03897 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.82■□□□□ 0.6
MT-ND3P03897 AP002982.1-201ENST00000492365 877 ntBASIC18.82■□□□□ 0.6
MT-ND3P03897 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.82■□□□□ 0.6
MT-ND3P03897 AL355075.4-201ENST00000554988 638 ntBASIC18.82■□□□□ 0.6
MT-ND3P03897 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
MT-ND3P03897 AL353708.3-201ENST00000610272 989 ntBASIC18.82■□□□□ 0.6
MT-ND3P03897 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.82■□□□□ 0.6
MT-ND3P03897 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.82■□□□□ 0.6
MT-ND3P03897 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.82■□□□□ 0.6
MT-ND3P03897 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.82■□□□□ 0.6
MT-ND3P03897 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MT-ND3P03897 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.82■□□□□ 0.6
MT-ND3P03897 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
MT-ND3P03897 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MT-ND3P03897 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MT-ND3P03897 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MT-ND3P03897 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MT-ND3P03897 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MT-ND3P03897 AC020916.1-201ENST00000587762 1774 ntBASIC18.81■□□□□ 0.6
MT-ND3P03897 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MT-ND3P03897 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
MT-ND3P03897 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-ND3P03897 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-ND3P03897 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-ND3P03897 AP003071.4-201ENST00000562276 1284 ntBASIC18.81■□□□□ 0.6
MT-ND3P03897 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-ND3P03897 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-ND3P03897 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-ND3P03897 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.81■□□□□ 0.6
MT-ND3P03897 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MT-ND3P03897 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MT-ND3P03897 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND3P03897 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-ND3P03897 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.8■□□□□ 0.6
MT-ND3P03897 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
MT-ND3P03897 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.8■□□□□ 0.6
MT-ND3P03897 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
MT-ND3P03897 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.8■□□□□ 0.6
MT-ND3P03897 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.8■□□□□ 0.6
MT-ND3P03897 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.8■□□□□ 0.6
MT-ND3P03897 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 AC087499.1-201ENST00000418141 1075 ntBASIC18.8■□□□□ 0.6
MT-ND3P03897 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.8■□□□□ 0.6
MT-ND3P03897 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
MT-ND3P03897 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.8■□□□□ 0.6
MT-ND3P03897 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.8■□□□□ 0.6
MT-ND3P03897 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.8■□□□□ 0.6
MT-ND3P03897 AC133561.5-201ENST00000635547 218 ntBASIC18.8■□□□□ 0.6
MT-ND3P03897 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MT-ND3P03897 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.8■□□□□ 0.6
MT-ND3P03897 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.8■□□□□ 0.6
MT-ND3P03897 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.8■□□□□ 0.6
MT-ND3P03897 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND3P03897 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.8■□□□□ 0.6
MT-ND3P03897 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms