Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
PFDN1O60925 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PFDN1O60925 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN1O60925 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PFDN1O60925 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PFDN1O60925 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PFDN1O60925 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PFDN1O60925 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.52■□□□□ 0.23
PFDN1O60925 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PFDN1O60925 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PFDN1O60925 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PFDN1O60925 DBET-201ENST00000630918 3363 ntBASIC16.52■□□□□ 0.23
PFDN1O60925 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PFDN1O60925 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.52■□□□□ 0.23
PFDN1O60925 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PFDN1O60925 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PFDN1O60925 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PFDN1O60925 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PFDN1O60925 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.52■□□□□ 0.23
PFDN1O60925 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.51■□□□□ 0.23
PFDN1O60925 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PFDN1O60925 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
PFDN1O60925 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PFDN1O60925 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PFDN1O60925 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.51■□□□□ 0.23
PFDN1O60925 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
PFDN1O60925 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.51■□□□□ 0.23
PFDN1O60925 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.51■□□□□ 0.23
PFDN1O60925 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PFDN1O60925 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PFDN1O60925 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.51■□□□□ 0.23
PFDN1O60925 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.51■□□□□ 0.23
PFDN1O60925 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PFDN1O60925 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.51■□□□□ 0.23
PFDN1O60925 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PFDN1O60925 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.5■□□□□ 0.23
PFDN1O60925 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.5■□□□□ 0.23
PFDN1O60925 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PFDN1O60925 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.5■□□□□ 0.23
PFDN1O60925 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.5■□□□□ 0.23
PFDN1O60925 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
PFDN1O60925 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.5■□□□□ 0.23
PFDN1O60925 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.5■□□□□ 0.23
PFDN1O60925 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PFDN1O60925 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 Z92544.1-202ENST00000571933 1220 ntBASIC16.5■□□□□ 0.23
PFDN1O60925 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PFDN1O60925 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms