Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRRM3A6NNA2 AC012313.1-201ENST00000593393 3059 ntBASIC19.12■□□□□ 0.65
SRRM3A6NNA2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 GPALPP1-207ENST00000611650 899 ntBASIC19.12■□□□□ 0.65
SRRM3A6NNA2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.12■□□□□ 0.65
SRRM3A6NNA2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 FEM1AP3-201ENST00000403722 1741 ntBASIC19.11■□□□□ 0.65
SRRM3A6NNA2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.11■□□□□ 0.65
SRRM3A6NNA2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 AL031133.1-201ENST00000406807 723 ntBASIC19.1■□□□□ 0.65
SRRM3A6NNA2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 MYC-208ENST00000641036 567 ntBASIC19.1■□□□□ 0.65
SRRM3A6NNA2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM3A6NNA2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms