Protein–RNA interactions for Protein: Q96M98

PACRG, Parkin coregulated gene protein, humanhuman

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGQ96M98 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PACRGQ96M98 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
PACRGQ96M98 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.02□□□□□ -0.16
PACRGQ96M98 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.02□□□□□ -0.16
PACRGQ96M98 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PACRGQ96M98 AC009237.3-201ENST00000393279 1427 ntBASIC14.02□□□□□ -0.16
PACRGQ96M98 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PACRGQ96M98 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.02□□□□□ -0.17
PACRGQ96M98 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.02□□□□□ -0.17
PACRGQ96M98 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.02□□□□□ -0.17
PACRGQ96M98 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.02□□□□□ -0.17
PACRGQ96M98 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.02□□□□□ -0.17
PACRGQ96M98 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PACRGQ96M98 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PACRGQ96M98 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PACRGQ96M98 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PACRGQ96M98 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PACRGQ96M98 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.02□□□□□ -0.17
PACRGQ96M98 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PACRGQ96M98 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PACRGQ96M98 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
PACRGQ96M98 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
PACRGQ96M98 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.01□□□□□ -0.17
PACRGQ96M98 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
PACRGQ96M98 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PACRGQ96M98 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.01□□□□□ -0.17
PACRGQ96M98 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PACRGQ96M98 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
PACRGQ96M98 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.01□□□□□ -0.17
PACRGQ96M98 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.01□□□□□ -0.17
PACRGQ96M98 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.01□□□□□ -0.17
PACRGQ96M98 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PACRGQ96M98 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.01□□□□□ -0.17
PACRGQ96M98 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PACRGQ96M98 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PACRGQ96M98 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PACRGQ96M98 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14□□□□□ -0.17
PACRGQ96M98 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PACRGQ96M98 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14□□□□□ -0.17
PACRGQ96M98 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
PACRGQ96M98 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
PACRGQ96M98 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14□□□□□ -0.17
PACRGQ96M98 GUSBP5-201ENST00000418136 578 ntBASIC14□□□□□ -0.17
PACRGQ96M98 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14□□□□□ -0.17
PACRGQ96M98 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14□□□□□ -0.17
PACRGQ96M98 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14□□□□□ -0.17
PACRGQ96M98 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 SRR-208ENST00000576848 588 ntTSL 4 BASIC14□□□□□ -0.17
PACRGQ96M98 AC136469.2-201ENST00000623944 1028 ntBASIC14□□□□□ -0.17
PACRGQ96M98 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14□□□□□ -0.17
PACRGQ96M98 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PACRGQ96M98 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14□□□□□ -0.17
PACRGQ96M98 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PACRGQ96M98 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms