Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.62■□□□□ 0.73
TTC39CQ8N584 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC39CQ8N584 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC39CQ8N584 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TTC39CQ8N584 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC39CQ8N584 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.62■□□□□ 0.73
TTC39CQ8N584 AC022616.7-201ENST00000525383 220 ntBASIC19.62■□□□□ 0.73
TTC39CQ8N584 SDHAP2-201ENST00000455183 2001 ntBASIC19.62■□□□□ 0.73
TTC39CQ8N584 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TTC39CQ8N584 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC39CQ8N584 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TTC39CQ8N584 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TTC39CQ8N584 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TTC39CQ8N584 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC39CQ8N584 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TTC39CQ8N584 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC39CQ8N584 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TTC39CQ8N584 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TTC39CQ8N584 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 AL162741.1-201ENST00000565563 1558 ntBASIC19.61■□□□□ 0.73
TTC39CQ8N584 AC090164.3-201ENST00000610780 2143 ntBASIC19.61■□□□□ 0.73
TTC39CQ8N584 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.61■□□□□ 0.73
TTC39CQ8N584 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.61■□□□□ 0.73
TTC39CQ8N584 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TTC39CQ8N584 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.61■□□□□ 0.73
TTC39CQ8N584 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
TTC39CQ8N584 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.61■□□□□ 0.73
TTC39CQ8N584 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TTC39CQ8N584 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.61■□□□□ 0.73
TTC39CQ8N584 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.61■□□□□ 0.73
TTC39CQ8N584 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.61■□□□□ 0.73
TTC39CQ8N584 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TTC39CQ8N584 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TTC39CQ8N584 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39CQ8N584 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39CQ8N584 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39CQ8N584 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39CQ8N584 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39CQ8N584 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39CQ8N584 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39CQ8N584 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 GMCL1P1-201ENST00000463439 1581 ntBASIC19.6■□□□□ 0.73
TTC39CQ8N584 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39CQ8N584 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39CQ8N584 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39CQ8N584 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC39CQ8N584 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39CQ8N584 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39CQ8N584 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 AL049597.2-201ENST00000565575 961 ntBASIC19.59■□□□□ 0.73
TTC39CQ8N584 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TTC39CQ8N584 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms