Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC28Q86X40 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRC28Q86X40 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 HTR7P1-201ENST00000538670 1336 ntBASIC16.46■□□□□ 0.23
LRRC28Q86X40 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC28Q86X40 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC28Q86X40 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC28Q86X40 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
LRRC28Q86X40 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LRRC28Q86X40 SLC25A6P5-201ENST00000435663 894 ntBASIC16.46■□□□□ 0.23
LRRC28Q86X40 YBX1P10-201ENST00000444752 975 ntBASIC16.46■□□□□ 0.23
LRRC28Q86X40 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
LRRC28Q86X40 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC28Q86X40 AL049637.2-201ENST00000641778 930 ntBASIC16.46■□□□□ 0.23
LRRC28Q86X40 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
LRRC28Q86X40 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC28Q86X40 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRRC28Q86X40 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC28Q86X40 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
LRRC28Q86X40 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 MIR4497-201ENST00000583208 89 ntBASIC16.45■□□□□ 0.22
LRRC28Q86X40 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC28Q86X40 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC28Q86X40 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.44■□□□□ 0.22
LRRC28Q86X40 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
LRRC28Q86X40 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRC28Q86X40 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRC28Q86X40 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC28Q86X40 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.44■□□□□ 0.22
LRRC28Q86X40 AF186192.3-201ENST00000583427 947 ntBASIC16.44■□□□□ 0.22
LRRC28Q86X40 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms