Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 AL023875.1-201ENST00000640777 796 ntBASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCHD4Q6ZW05 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 LINC00896-202ENST00000609602 2128 ntBASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTCHD4Q6ZW05 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.02■□□□□ 0.31
PTCHD4Q6ZW05 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PTCHD4Q6ZW05 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.02■□□□□ 0.31
PTCHD4Q6ZW05 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.02■□□□□ 0.31
PTCHD4Q6ZW05 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.02■□□□□ 0.31
PTCHD4Q6ZW05 RCC2P6-201ENST00000526625 1557 ntBASIC17.02■□□□□ 0.31
PTCHD4Q6ZW05 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PTCHD4Q6ZW05 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTCHD4Q6ZW05 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.02■□□□□ 0.31
PTCHD4Q6ZW05 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 KRT8P41-201ENST00000533985 1514 ntBASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 KRASP1-201ENST00000407852 552 ntBASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 KRT18P6-201ENST00000555540 1265 ntBASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 MYC-208ENST00000641036 567 ntBASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.01■□□□□ 0.31
PTCHD4Q6ZW05 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 KATNBL1P6-202ENST00000562413 1466 ntBASIC17■□□□□ 0.31
PTCHD4Q6ZW05 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCHD4Q6ZW05 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms