Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB3P54753 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.28■□□□□ 0.68
EPHB3P54753 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB3P54753 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
EPHB3P54753 AL845331.1-201ENST00000424978 1190 ntBASIC19.28■□□□□ 0.68
EPHB3P54753 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB3P54753 VENTXP7-201ENST00000475503 772 ntBASIC19.28■□□□□ 0.68
EPHB3P54753 UNC93B7-201ENST00000509439 705 ntBASIC19.28■□□□□ 0.68
EPHB3P54753 FOSL1P1-201ENST00000511041 816 ntBASIC19.28■□□□□ 0.68
EPHB3P54753 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.28■□□□□ 0.68
EPHB3P54753 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.28■□□□□ 0.68
EPHB3P54753 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.28■□□□□ 0.68
EPHB3P54753 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
EPHB3P54753 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.28■□□□□ 0.68
EPHB3P54753 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.28■□□□□ 0.68
EPHB3P54753 AC008687.5-201ENST00000593746 558 ntBASIC19.28■□□□□ 0.68
EPHB3P54753 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.28■□□□□ 0.68
EPHB3P54753 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.28■□□□□ 0.68
EPHB3P54753 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
EPHB3P54753 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB3P54753 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB3P54753 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB3P54753 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB3P54753 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.28■□□□□ 0.68
EPHB3P54753 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB3P54753 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB3P54753 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EPHB3P54753 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.27■□□□□ 0.68
EPHB3P54753 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB3P54753 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB3P54753 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
EPHB3P54753 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB3P54753 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB3P54753 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.27■□□□□ 0.68
EPHB3P54753 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.27■□□□□ 0.68
EPHB3P54753 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB3P54753 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
EPHB3P54753 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.27■□□□□ 0.68
EPHB3P54753 FAAHP1-202ENST00000446499 1238 ntBASIC19.27■□□□□ 0.68
EPHB3P54753 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.27■□□□□ 0.68
EPHB3P54753 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.27■□□□□ 0.68
EPHB3P54753 IFNL4P1-201ENST00000607083 540 ntBASIC19.27■□□□□ 0.68
EPHB3P54753 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
EPHB3P54753 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.27■□□□□ 0.68
EPHB3P54753 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
EPHB3P54753 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
EPHB3P54753 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
EPHB3P54753 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
EPHB3P54753 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
EPHB3P54753 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EPHB3P54753 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
EPHB3P54753 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
EPHB3P54753 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB3P54753 LINC00167-201ENST00000530583 1419 ntBASIC19.26■□□□□ 0.67
EPHB3P54753 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB3P54753 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
EPHB3P54753 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
EPHB3P54753 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB3P54753 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.26■□□□□ 0.67
EPHB3P54753 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB3P54753 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB3P54753 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.26■□□□□ 0.67
EPHB3P54753 RN7SL606P-201ENST00000472779 293 ntBASIC19.26■□□□□ 0.67
EPHB3P54753 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.26■□□□□ 0.67
EPHB3P54753 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.26■□□□□ 0.67
EPHB3P54753 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
EPHB3P54753 AL732292.2-201ENST00000609649 430 ntBASIC19.26■□□□□ 0.67
EPHB3P54753 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.26■□□□□ 0.67
EPHB3P54753 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB3P54753 AC009102.3-201ENST00000623118 1491 ntBASIC19.26■□□□□ 0.67
EPHB3P54753 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB3P54753 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB3P54753 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB3P54753 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB3P54753 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EPHB3P54753 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 AC112777.1-201ENST00000540175 1423 ntBASIC19.25■□□□□ 0.67
EPHB3P54753 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHB3P54753 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHB3P54753 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHB3P54753 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
EPHB3P54753 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHB3P54753 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHB3P54753 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 KRT17P6-201ENST00000453795 1220 ntBASIC19.25■□□□□ 0.67
EPHB3P54753 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.25■□□□□ 0.67
EPHB3P54753 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.25■□□□□ 0.67
EPHB3P54753 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms