Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SLC9A3P48764 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SLC9A3P48764 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC9A3P48764 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SLC9A3P48764 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC9A3P48764 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.96■□□□□ 0.31
SLC9A3P48764 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.96■□□□□ 0.31
SLC9A3P48764 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC9A3P48764 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.96■□□□□ 0.31
SLC9A3P48764 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC9A3P48764 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.96■□□□□ 0.3
SLC9A3P48764 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SLC9A3P48764 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC9A3P48764 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.3
SLC9A3P48764 AC112777.1-201ENST00000540175 1423 ntBASIC16.96■□□□□ 0.3
SLC9A3P48764 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC9A3P48764 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SLC9A3P48764 AL499627.1-201ENST00000569373 2188 ntBASIC16.95■□□□□ 0.3
SLC9A3P48764 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC9A3P48764 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC9A3P48764 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SLC9A3P48764 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SLC9A3P48764 CD99P1-205ENST00000527459 561 ntBASIC16.95■□□□□ 0.3
SLC9A3P48764 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC9A3P48764 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC9A3P48764 CKBP1-201ENST00000565489 1086 ntBASIC16.95■□□□□ 0.3
SLC9A3P48764 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 AC073195.1-201ENST00000607241 877 ntBASIC16.95■□□□□ 0.3
SLC9A3P48764 AC011298.2-201ENST00000617989 482 ntBASIC16.95■□□□□ 0.3
SLC9A3P48764 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC9A3P48764 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC9A3P48764 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC9A3P48764 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC9A3P48764 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC9A3P48764 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SLC9A3P48764 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC9A3P48764 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC9A3P48764 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC9A3P48764 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC9A3P48764 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SLC9A3P48764 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 RPPH1-201ENST00000516869 333 ntBASIC16.94■□□□□ 0.3
SLC9A3P48764 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC9A3P48764 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLC9A3P48764 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC9A3P48764 MIR4651-201ENST00000582622 73 ntBASIC16.94■□□□□ 0.3
SLC9A3P48764 AF186192.3-201ENST00000583427 947 ntBASIC16.94■□□□□ 0.3
SLC9A3P48764 CR392000.1-201ENST00000624770 1228 ntBASIC16.94■□□□□ 0.3
SLC9A3P48764 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC9A3P48764 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLC9A3P48764 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC9A3P48764 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC9A3P48764 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC9A3P48764 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SLC9A3P48764 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC9A3P48764 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms