Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX1P22670 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX1P22670 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX1P22670 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFX1P22670 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX1P22670 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX1P22670 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX1P22670 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX1P22670 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.12■□□□□ 0.81
RFX1P22670 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.12■□□□□ 0.81
RFX1P22670 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX1P22670 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.12■□□□□ 0.81
RFX1P22670 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
RFX1P22670 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RFX1P22670 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX1P22670 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.12■□□□□ 0.81
RFX1P22670 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.12■□□□□ 0.81
RFX1P22670 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.12■□□□□ 0.81
RFX1P22670 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFX1P22670 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
RFX1P22670 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
RFX1P22670 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RFX1P22670 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 AL450487.1-201ENST00000426799 995 ntBASIC20.11■□□□□ 0.81
RFX1P22670 HCG4P8-203ENST00000443049 980 ntBASIC20.11■□□□□ 0.81
RFX1P22670 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.11■□□□□ 0.81
RFX1P22670 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.11■□□□□ 0.81
RFX1P22670 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
RFX1P22670 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.11■□□□□ 0.81
RFX1P22670 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX1P22670 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX1P22670 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.11■□□□□ 0.81
RFX1P22670 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFX1P22670 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.1■□□□□ 0.81
RFX1P22670 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.1■□□□□ 0.81
RFX1P22670 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.1■□□□□ 0.81
RFX1P22670 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.1■□□□□ 0.81
RFX1P22670 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
RFX1P22670 AL691432.3-201ENST00000621860 400 ntBASIC20.1■□□□□ 0.81
RFX1P22670 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.1■□□□□ 0.81
RFX1P22670 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX1P22670 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RFX1P22670 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.09■□□□□ 0.81
RFX1P22670 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RFX1P22670 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX1P22670 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.09■□□□□ 0.81
RFX1P22670 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.09■□□□□ 0.81
RFX1P22670 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.09■□□□□ 0.81
RFX1P22670 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 AP000593.1-201ENST00000393668 712 ntBASIC20.09■□□□□ 0.81
RFX1P22670 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.09■□□□□ 0.81
RFX1P22670 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
RFX1P22670 MCCD1P1-208ENST00000445732 328 ntBASIC20.09■□□□□ 0.81
RFX1P22670 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX1P22670 AC008622.2-201ENST00000617006 1229 ntBASIC20.09■□□□□ 0.81
RFX1P22670 AL121956.5-201ENST00000625261 221 ntBASIC20.09■□□□□ 0.81
RFX1P22670 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RFX1P22670 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 AL499627.1-201ENST00000569373 2188 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms