Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 AL158211.5-201ENST00000623583 2518 ntBASIC20.4■□□□□ 0.86
ATP2A2P16615 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2A2P16615 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A2P16615 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A2P16615 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A2P16615 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2A2P16615 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A2P16615 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A2P16615 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A2P16615 AL691432.2-201ENST00000607222 2038 ntBASIC20.39■□□□□ 0.86
ATP2A2P16615 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.39■□□□□ 0.86
ATP2A2P16615 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A2P16615 AC104417.2-201ENST00000562989 1793 ntBASIC20.39■□□□□ 0.86
ATP2A2P16615 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A2P16615 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A2P16615 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
ATP2A2P16615 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ATP2A2P16615 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A2P16615 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP2A2P16615 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A2P16615 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP2A2P16615 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ATP2A2P16615 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.39■□□□□ 0.85
ATP2A2P16615 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP2A2P16615 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP2A2P16615 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.39■□□□□ 0.85
ATP2A2P16615 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.39■□□□□ 0.85
ATP2A2P16615 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ATP2A2P16615 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ATP2A2P16615 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A2P16615 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A2P16615 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A2P16615 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A2P16615 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A2P16615 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A2P16615 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A2P16615 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A2P16615 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A2P16615 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP2A2P16615 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP2A2P16615 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A2P16615 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A2P16615 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A2P16615 HLA-A-201ENST00000376802 1334 ntBASIC20.38■□□□□ 0.85
ATP2A2P16615 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2A2P16615 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
ATP2A2P16615 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A2P16615 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A2P16615 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP2A2P16615 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP2A2P16615 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2A2P16615 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2A2P16615 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2A2P16615 KRT16P4-201ENST00000453883 522 ntBASIC20.38■□□□□ 0.85
ATP2A2P16615 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.38■□□□□ 0.85
ATP2A2P16615 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2A2P16615 AL353801.3-201ENST00000609898 542 ntBASIC20.38■□□□□ 0.85
ATP2A2P16615 BX640515.1-201ENST00000617215 977 ntBASIC20.38■□□□□ 0.85
ATP2A2P16615 AC139530.3-201ENST00000620344 690 ntBASIC20.38■□□□□ 0.85
ATP2A2P16615 AC117500.6-201ENST00000624871 588 ntBASIC20.38■□□□□ 0.85
ATP2A2P16615 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP2A2P16615 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A2P16615 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATP2A2P16615 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A2P16615 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A2P16615 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP2A2P16615 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ATP2A2P16615 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ATP2A2P16615 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP2A2P16615 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A2P16615 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 AC074051.2-201ENST00000565115 352 ntBASIC20.37■□□□□ 0.85
ATP2A2P16615 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.37■□□□□ 0.85
ATP2A2P16615 AL671883.3-201ENST00000603274 991 ntBASIC20.37■□□□□ 0.85
ATP2A2P16615 Z83836.1-201ENST00000624605 1642 ntBASIC20.37■□□□□ 0.85
ATP2A2P16615 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A2P16615 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A2P16615 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP2A2P16615 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP2A2P16615 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP2A2P16615 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP2A2P16615 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP2A2P16615 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A2P16615 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms