Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.23■□□□□ 0.19
UBCP0CG48 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
UBCP0CG48 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UBCP0CG48 RPS2P4-201ENST00000476944 856 ntBASIC16.23■□□□□ 0.19
UBCP0CG48 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.23■□□□□ 0.19
UBCP0CG48 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UBCP0CG48 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
UBCP0CG48 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
UBCP0CG48 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
UBCP0CG48 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
UBCP0CG48 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UBCP0CG48 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBCP0CG48 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.22■□□□□ 0.19
UBCP0CG48 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
UBCP0CG48 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
UBCP0CG48 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.22■□□□□ 0.19
UBCP0CG48 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.22■□□□□ 0.19
UBCP0CG48 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.22■□□□□ 0.19
UBCP0CG48 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.22■□□□□ 0.19
UBCP0CG48 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.22■□□□□ 0.19
UBCP0CG48 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
UBCP0CG48 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.22■□□□□ 0.19
UBCP0CG48 AC073648.6-201ENST00000641589 218 ntBASIC16.22■□□□□ 0.19
UBCP0CG48 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.22■□□□□ 0.19
UBCP0CG48 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
UBCP0CG48 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.22■□□□□ 0.19
UBCP0CG48 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.22■□□□□ 0.19
UBCP0CG48 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.22■□□□□ 0.19
UBCP0CG48 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.22■□□□□ 0.19
UBCP0CG48 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBCP0CG48 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
UBCP0CG48 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.21■□□□□ 0.19
UBCP0CG48 AC135776.1-201ENST00000319817 2481 ntBASIC16.21■□□□□ 0.19
UBCP0CG48 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.21■□□□□ 0.19
UBCP0CG48 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.21■□□□□ 0.19
UBCP0CG48 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
UBCP0CG48 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.21■□□□□ 0.19
UBCP0CG48 FAM207BP-201ENST00000447172 505 ntBASIC16.21■□□□□ 0.19
UBCP0CG48 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.21■□□□□ 0.19
UBCP0CG48 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.21■□□□□ 0.19
UBCP0CG48 KRT18P41-201ENST00000518924 1277 ntBASIC16.21■□□□□ 0.19
UBCP0CG48 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.21■□□□□ 0.19
UBCP0CG48 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
UBCP0CG48 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.21■□□□□ 0.19
UBCP0CG48 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
UBCP0CG48 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.21■□□□□ 0.19
UBCP0CG48 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.21■□□□□ 0.19
UBCP0CG48 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBCP0CG48 MYLKP1-201ENST00000509077 1580 ntBASIC16.21■□□□□ 0.18
UBCP0CG48 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBCP0CG48 AL109659.2-201ENST00000606809 1674 ntBASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms