Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.03■□□□□ 0.8
EXTL3O43909 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.03■□□□□ 0.8
EXTL3O43909 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.03■□□□□ 0.8
EXTL3O43909 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.03■□□□□ 0.8
EXTL3O43909 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.03■□□□□ 0.8
EXTL3O43909 LINC01238-205ENST00000567549 1107 ntBASIC20.03■□□□□ 0.8
EXTL3O43909 AC087388.1-201ENST00000571370 1112 ntBASIC20.03■□□□□ 0.8
EXTL3O43909 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.03■□□□□ 0.8
EXTL3O43909 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.03■□□□□ 0.8
EXTL3O43909 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
EXTL3O43909 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.03■□□□□ 0.8
EXTL3O43909 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.03■□□□□ 0.8
EXTL3O43909 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
EXTL3O43909 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXTL3O43909 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EXTL3O43909 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.02■□□□□ 0.8
EXTL3O43909 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXTL3O43909 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
EXTL3O43909 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
EXTL3O43909 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXTL3O43909 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXTL3O43909 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXTL3O43909 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.02■□□□□ 0.8
EXTL3O43909 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXTL3O43909 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXTL3O43909 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.02■□□□□ 0.8
EXTL3O43909 PVRIG2P-201ENST00000435460 978 ntBASIC20.02■□□□□ 0.8
EXTL3O43909 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.02■□□□□ 0.8
EXTL3O43909 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.02■□□□□ 0.8
EXTL3O43909 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
EXTL3O43909 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXTL3O43909 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EXTL3O43909 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.02■□□□□ 0.8
EXTL3O43909 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.02■□□□□ 0.8
EXTL3O43909 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
EXTL3O43909 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.02■□□□□ 0.79
EXTL3O43909 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
EXTL3O43909 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
EXTL3O43909 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.02■□□□□ 0.79
EXTL3O43909 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.02■□□□□ 0.79
EXTL3O43909 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXTL3O43909 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXTL3O43909 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXTL3O43909 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EXTL3O43909 AC099343.3-201ENST00000605834 2503 ntBASIC20.01■□□□□ 0.79
EXTL3O43909 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.01■□□□□ 0.79
EXTL3O43909 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXTL3O43909 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.01■□□□□ 0.79
EXTL3O43909 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
EXTL3O43909 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXTL3O43909 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
EXTL3O43909 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EXTL3O43909 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.01■□□□□ 0.79
EXTL3O43909 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.01■□□□□ 0.79
EXTL3O43909 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.01■□□□□ 0.79
EXTL3O43909 AC090164.3-201ENST00000610780 2143 ntBASIC20.01■□□□□ 0.79
EXTL3O43909 AC079602.3-201ENST00000623931 403 ntBASIC20.01■□□□□ 0.79
EXTL3O43909 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EXTL3O43909 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXTL3O43909 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXTL3O43909 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EXTL3O43909 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.01■□□□□ 0.79
EXTL3O43909 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.01■□□□□ 0.79
EXTL3O43909 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.01■□□□□ 0.79
EXTL3O43909 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXTL3O43909 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.01■□□□□ 0.79
EXTL3O43909 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20■□□□□ 0.79
EXTL3O43909 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EXTL3O43909 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20■□□□□ 0.79
EXTL3O43909 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20■□□□□ 0.79
EXTL3O43909 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20■□□□□ 0.79
EXTL3O43909 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20■□□□□ 0.79
EXTL3O43909 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20■□□□□ 0.79
EXTL3O43909 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20■□□□□ 0.79
EXTL3O43909 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20■□□□□ 0.79
EXTL3O43909 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20■□□□□ 0.79
EXTL3O43909 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20■□□□□ 0.79
EXTL3O43909 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms