Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH17O14917 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH17O14917 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH17O14917 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH17O14917 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH17O14917 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDH17O14917 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH17O14917 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH17O14917 KRT8P45-201ENST00000414328 1447 ntBASIC17.65■□□□□ 0.42
PCDH17O14917 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH17O14917 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH17O14917 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDH17O14917 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDH17O14917 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
PCDH17O14917 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH17O14917 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH17O14917 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PCDH17O14917 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH17O14917 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH17O14917 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH17O14917 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH17O14917 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
PCDH17O14917 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH17O14917 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH17O14917 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH17O14917 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDH17O14917 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDH17O14917 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
PCDH17O14917 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.64■□□□□ 0.41
PCDH17O14917 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDH17O14917 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDH17O14917 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH17O14917 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDH17O14917 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
PCDH17O14917 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH17O14917 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDH17O14917 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCDH17O14917 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH17O14917 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH17O14917 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDH17O14917 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDH17O14917 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.63■□□□□ 0.41
PCDH17O14917 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH17O14917 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDH17O14917 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH17O14917 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PCDH17O14917 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDH17O14917 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 MCCD1P1-208ENST00000445732 328 ntBASIC17.63■□□□□ 0.41
PCDH17O14917 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH17O14917 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH17O14917 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
PCDH17O14917 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms