Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
AP3D1O14617 AC099398.1-201ENST00000567919 2776 ntBASIC17.3■□□□□ 0.36
AP3D1O14617 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3D1O14617 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3D1O14617 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP3D1O14617 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP3D1O14617 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.3■□□□□ 0.36
AP3D1O14617 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.3■□□□□ 0.36
AP3D1O14617 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
AP3D1O14617 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
AP3D1O14617 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3D1O14617 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.3■□□□□ 0.36
AP3D1O14617 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
AP3D1O14617 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3D1O14617 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3D1O14617 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.3■□□□□ 0.36
AP3D1O14617 TMEM191A-211ENST00000637163 1067 ntBASIC17.3■□□□□ 0.36
AP3D1O14617 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3D1O14617 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
AP3D1O14617 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
AP3D1O14617 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
AP3D1O14617 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
AP3D1O14617 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.3■□□□□ 0.36
AP3D1O14617 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
AP3D1O14617 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3D1O14617 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP3D1O14617 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
AP3D1O14617 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
AP3D1O14617 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
AP3D1O14617 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 FAM207BP-201ENST00000447172 505 ntBASIC17.29■□□□□ 0.36
AP3D1O14617 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3D1O14617 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.29■□□□□ 0.36
AP3D1O14617 AC233702.5-201ENST00000584107 538 ntBASIC17.29■□□□□ 0.36
AP3D1O14617 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.29■□□□□ 0.36
AP3D1O14617 Z99916.2-201ENST00000604037 246 ntBASIC17.29■□□□□ 0.36
AP3D1O14617 AL049637.2-201ENST00000641778 930 ntBASIC17.29■□□□□ 0.36
AP3D1O14617 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 BICD1-207ENST00000551848 1962 ntBASIC17.29■□□□□ 0.36
AP3D1O14617 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
AP3D1O14617 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
AP3D1O14617 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
AP3D1O14617 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3D1O14617 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.29■□□□□ 0.36
AP3D1O14617 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP3D1O14617 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3D1O14617 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.28■□□□□ 0.36
AP3D1O14617 AC073592.3-201ENST00000625118 1834 ntBASIC17.28■□□□□ 0.36
AP3D1O14617 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AP3D1O14617 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AP3D1O14617 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AP3D1O14617 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3D1O14617 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.28■□□□□ 0.36
AP3D1O14617 AC012618.2-201ENST00000428058 849 ntBASIC17.28■□□□□ 0.36
AP3D1O14617 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3D1O14617 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.28■□□□□ 0.36
AP3D1O14617 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
AP3D1O14617 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.28■□□□□ 0.36
AP3D1O14617 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP3D1O14617 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms