Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.89□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PRSS44-201ENST00000515154 1146 ntBASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AL023803.3-201ENST00000615559 522 ntBASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC006011.2-201ENST00000621313 1158 ntBASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TCRBV4S1A1TA0A5B7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AL354751.1-201ENST00000412768 1863 ntBASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TSPY21P-201ENST00000433481 731 ntBASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC140113.3-201ENST00000605663 199 ntBASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC139887.4-201ENST00000607877 719 ntBASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms