Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 LINC01311-201ENST00000565162 1445 ntBASIC20.58■□□□□ 0.88
ATP6V0A4Q9HBG4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP6V0A4Q9HBG4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP6V0A4Q9HBG4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP6V0A4Q9HBG4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ATP6V0A4Q9HBG4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 KRT18P48-201ENST00000434763 852 ntBASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 AC069148.1-201ENST00000608741 768 ntBASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 AC083849.1-201ENST00000615227 514 ntBASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 HYMAI.1-201ENST00000620949 238 ntBASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 AL157888.1-201ENST00000631930 593 ntBASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP6V0A4Q9HBG4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 AC120498.9-201ENST00000339021 3867 ntBASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 KRT8P50-201ENST00000562022 1438 ntBASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 KRT126P-201ENST00000549467 1181 ntBASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ATP6V0A4Q9HBG4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 AP000593.1-201ENST00000393668 712 ntBASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 MIR3180-4-201ENST00000582223 153 ntBASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A4Q9HBG4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 HCG4P8-203ENST00000443049 980 ntBASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms