Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.06□□□□□ -0.16
VGLL1Q99990 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.06□□□□□ -0.16
VGLL1Q99990 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.06□□□□□ -0.16
VGLL1Q99990 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.06□□□□□ -0.16
VGLL1Q99990 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.06□□□□□ -0.16
VGLL1Q99990 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.06□□□□□ -0.16
VGLL1Q99990 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 KRT8P32-201ENST00000512863 1461 ntBASIC14.06□□□□□ -0.16
VGLL1Q99990 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
VGLL1Q99990 AC135776.1-201ENST00000319817 2481 ntBASIC14.05□□□□□ -0.16
VGLL1Q99990 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.05□□□□□ -0.16
VGLL1Q99990 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VGLL1Q99990 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.05□□□□□ -0.16
VGLL1Q99990 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VGLL1Q99990 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VGLL1Q99990 KRASP1-201ENST00000407852 552 ntBASIC14.05□□□□□ -0.16
VGLL1Q99990 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.05□□□□□ -0.16
VGLL1Q99990 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.05□□□□□ -0.16
VGLL1Q99990 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.05□□□□□ -0.16
VGLL1Q99990 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.05□□□□□ -0.16
VGLL1Q99990 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
VGLL1Q99990 AL023875.1-201ENST00000640777 796 ntBASIC14.05□□□□□ -0.16
VGLL1Q99990 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VGLL1Q99990 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.05□□□□□ -0.16
VGLL1Q99990 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VGLL1Q99990 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VGLL1Q99990 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VGLL1Q99990 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.05□□□□□ -0.16
VGLL1Q99990 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
VGLL1Q99990 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.04□□□□□ -0.16
VGLL1Q99990 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VGLL1Q99990 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
VGLL1Q99990 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
VGLL1Q99990 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
VGLL1Q99990 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
VGLL1Q99990 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
VGLL1Q99990 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.04□□□□□ -0.16
VGLL1Q99990 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VGLL1Q99990 AL355802.2-201ENST00000402069 882 ntBASIC14.04□□□□□ -0.16
VGLL1Q99990 HLA-L-209ENST00000420110 1011 ntBASIC14.04□□□□□ -0.16
VGLL1Q99990 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.04□□□□□ -0.16
VGLL1Q99990 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.04□□□□□ -0.16
VGLL1Q99990 RNA5SP413-201ENST00000516373 109 ntBASIC14.04□□□□□ -0.16
VGLL1Q99990 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.04□□□□□ -0.16
VGLL1Q99990 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.04□□□□□ -0.16
VGLL1Q99990 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.04□□□□□ -0.16
VGLL1Q99990 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.04□□□□□ -0.16
VGLL1Q99990 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.04□□□□□ -0.16
VGLL1Q99990 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.04□□□□□ -0.16
VGLL1Q99990 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.04□□□□□ -0.16
VGLL1Q99990 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.04□□□□□ -0.16
VGLL1Q99990 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.04□□□□□ -0.16
VGLL1Q99990 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
VGLL1Q99990 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
VGLL1Q99990 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.04□□□□□ -0.16
VGLL1Q99990 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.04□□□□□ -0.16
VGLL1Q99990 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.04□□□□□ -0.16
VGLL1Q99990 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms