Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40CQ96S21 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB40CQ96S21 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40CQ96S21 KRT8P32-201ENST00000512863 1461 ntBASIC15.02■□□□□ -0
RAB40CQ96S21 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB40CQ96S21 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40CQ96S21 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40CQ96S21 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40CQ96S21 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40CQ96S21 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40CQ96S21 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RAB40CQ96S21 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40CQ96S21 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.02■□□□□ -0
RAB40CQ96S21 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40CQ96S21 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.02■□□□□ -0
RAB40CQ96S21 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RAB40CQ96S21 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.02■□□□□ -0
RAB40CQ96S21 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.02■□□□□ -0
RAB40CQ96S21 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.02■□□□□ -0
RAB40CQ96S21 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.02■□□□□ -0
RAB40CQ96S21 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.02■□□□□ -0
RAB40CQ96S21 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RAB40CQ96S21 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.02■□□□□ -0
RAB40CQ96S21 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.02■□□□□ -0
RAB40CQ96S21 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40CQ96S21 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.02■□□□□ -0
RAB40CQ96S21 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.02■□□□□ -0
RAB40CQ96S21 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
RAB40CQ96S21 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
RAB40CQ96S21 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40CQ96S21 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40CQ96S21 REXO1L9P-201ENST00000604264 2108 ntBASIC15.02□□□□□ -0.01
RAB40CQ96S21 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40CQ96S21 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40CQ96S21 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40CQ96S21 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40CQ96S21 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40CQ96S21 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RAB40CQ96S21 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40CQ96S21 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40CQ96S21 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RAB40CQ96S21 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40CQ96S21 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40CQ96S21 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.02□□□□□ -0.01
RAB40CQ96S21 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40CQ96S21 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40CQ96S21 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40CQ96S21 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40CQ96S21 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 AC008556.1-201ENST00000610908 2040 ntBASIC15.01□□□□□ -0.01
RAB40CQ96S21 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40CQ96S21 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 SLC29A4P1-201ENST00000398760 971 ntBASIC15.01□□□□□ -0.01
RAB40CQ96S21 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40CQ96S21 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40CQ96S21 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40CQ96S21 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40CQ96S21 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RAB40CQ96S21 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40CQ96S21 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15□□□□□ -0.01
RAB40CQ96S21 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
RAB40CQ96S21 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15□□□□□ -0.01
RAB40CQ96S21 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15□□□□□ -0.01
RAB40CQ96S21 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15□□□□□ -0.01
RAB40CQ96S21 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB40CQ96S21 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms