Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 CCR12P-201ENST00000446203 998 ntBASIC18.49■□□□□ 0.55
LDB1Q86U70 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.49■□□□□ 0.55
LDB1Q86U70 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
LDB1Q86U70 CR769767.2-201ENST00000622735 460 ntBASIC18.49■□□□□ 0.55
LDB1Q86U70 AC116562.4-202ENST00000641738 218 ntBASIC18.49■□□□□ 0.55
LDB1Q86U70 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.49■□□□□ 0.55
LDB1Q86U70 MYLKP1-201ENST00000509077 1580 ntBASIC18.49■□□□□ 0.55
LDB1Q86U70 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LDB1Q86U70 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LDB1Q86U70 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.49■□□□□ 0.55
LDB1Q86U70 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
LDB1Q86U70 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
LDB1Q86U70 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.48■□□□□ 0.55
LDB1Q86U70 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 TSPY14P-201ENST00000303979 915 ntBASIC18.48■□□□□ 0.55
LDB1Q86U70 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
LDB1Q86U70 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.48■□□□□ 0.55
LDB1Q86U70 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.48■□□□□ 0.55
LDB1Q86U70 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.48■□□□□ 0.55
LDB1Q86U70 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LDB1Q86U70 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.48■□□□□ 0.55
LDB1Q86U70 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LDB1Q86U70 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDB1Q86U70 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
LDB1Q86U70 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDB1Q86U70 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.47■□□□□ 0.55
LDB1Q86U70 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDB1Q86U70 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.47■□□□□ 0.55
LDB1Q86U70 BX088651.1-201ENST00000540551 451 ntBASIC18.47■□□□□ 0.55
LDB1Q86U70 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.47■□□□□ 0.55
LDB1Q86U70 NAPSB-206ENST00000562112 1266 ntBASIC18.47■□□□□ 0.55
LDB1Q86U70 AC034236.2-201ENST00000606662 1610 ntBASIC18.47■□□□□ 0.55
LDB1Q86U70 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDB1Q86U70 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.47■□□□□ 0.55
LDB1Q86U70 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LDB1Q86U70 KRT8P50-201ENST00000562022 1438 ntBASIC18.47■□□□□ 0.55
LDB1Q86U70 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.47■□□□□ 0.55
LDB1Q86U70 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 AC138932.1-201ENST00000534164 6830 ntBASIC18.46■□□□□ 0.55
LDB1Q86U70 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LDB1Q86U70 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 AL354751.1-201ENST00000412768 1863 ntBASIC18.46■□□□□ 0.55
LDB1Q86U70 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.46■□□□□ 0.55
LDB1Q86U70 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.46■□□□□ 0.55
LDB1Q86U70 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.46■□□□□ 0.55
LDB1Q86U70 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.46■□□□□ 0.55
LDB1Q86U70 ECEL1P2-202ENST00000465689 757 ntBASIC18.46■□□□□ 0.55
LDB1Q86U70 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 EGLN1P1-201ENST00000531623 762 ntBASIC18.46■□□□□ 0.55
LDB1Q86U70 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LDB1Q86U70 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.46■□□□□ 0.55
LDB1Q86U70 MYC-208ENST00000641036 567 ntBASIC18.46■□□□□ 0.55
LDB1Q86U70 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.46■□□□□ 0.55
LDB1Q86U70 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LDB1Q86U70 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LDB1Q86U70 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
LDB1Q86U70 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LDB1Q86U70 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LDB1Q86U70 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.45■□□□□ 0.54
LDB1Q86U70 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LDB1Q86U70 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
LDB1Q86U70 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LDB1Q86U70 AC135776.1-201ENST00000319817 2481 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms