Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 KRT18P48-201ENST00000434763 852 ntBASIC16.24■□□□□ 0.19
FREM1Q5H8C1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 MIR662-201ENST00000384847 95 ntBASIC16.24■□□□□ 0.19
FREM1Q5H8C1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.24■□□□□ 0.19
FREM1Q5H8C1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 ESPNP-201ENST00000270691 2015 ntBASIC16.23■□□□□ 0.19
FREM1Q5H8C1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 HCG4P8-203ENST00000443049 980 ntBASIC16.23■□□□□ 0.19
FREM1Q5H8C1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 AL163051.1-201ENST00000569214 1512 ntBASIC16.23■□□□□ 0.19
FREM1Q5H8C1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM1Q5H8C1 AL162741.1-201ENST00000565563 1558 ntBASIC16.22■□□□□ 0.19
FREM1Q5H8C1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 AL024508.2-201ENST00000607749 1894 ntBASIC16.22■□□□□ 0.19
FREM1Q5H8C1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.22■□□□□ 0.19
FREM1Q5H8C1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM1Q5H8C1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FREM1Q5H8C1 PVRIG2P-201ENST00000435460 978 ntBASIC16.21■□□□□ 0.19
FREM1Q5H8C1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.21■□□□□ 0.19
FREM1Q5H8C1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.21■□□□□ 0.19
FREM1Q5H8C1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM1Q5H8C1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM1Q5H8C1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms