Protein–RNA interactions for Protein: Q5EBL8

PDZD11, PDZ domain-containing protein 11, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11Q5EBL8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PDZD11Q5EBL8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 AP004607.4-201ENST00000530158 1459 ntBASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 AC099791.2-201ENST00000605725 427 ntBASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.21□□□□□ -0.13
PDZD11Q5EBL8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDZD11Q5EBL8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 NORAD-201ENST00000565493 5339 ntBASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 AC007326.2-201ENST00000624224 7579 ntBASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 PCDHA14-201ENST00000506751 2298 ntBASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDZD11Q5EBL8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDZD11Q5EBL8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms