Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIPK2O43353 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RIPK2O43353 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIPK2O43353 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.82■□□□□ 0.6
RIPK2O43353 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RIPK2O43353 AC108860.2-201ENST00000562760 2183 ntBASIC18.82■□□□□ 0.6
RIPK2O43353 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIPK2O43353 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIPK2O43353 AC080080.1-201ENST00000625121 2420 ntBASIC18.82■□□□□ 0.6
RIPK2O43353 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.82■□□□□ 0.6
RIPK2O43353 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.82■□□□□ 0.6
RIPK2O43353 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.82■□□□□ 0.6
RIPK2O43353 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIPK2O43353 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIPK2O43353 NCF1B-203ENST00000435988 1254 ntBASIC18.82■□□□□ 0.6
RIPK2O43353 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.82■□□□□ 0.6
RIPK2O43353 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.82■□□□□ 0.6
RIPK2O43353 KRT18P41-201ENST00000518924 1277 ntBASIC18.82■□□□□ 0.6
RIPK2O43353 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.82■□□□□ 0.6
RIPK2O43353 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.82■□□□□ 0.6
RIPK2O43353 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
RIPK2O43353 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIPK2O43353 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIPK2O43353 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.82■□□□□ 0.6
RIPK2O43353 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIPK2O43353 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RIPK2O43353 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.82■□□□□ 0.6
RIPK2O43353 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RIPK2O43353 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RIPK2O43353 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
RIPK2O43353 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.81■□□□□ 0.6
RIPK2O43353 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.81■□□□□ 0.6
RIPK2O43353 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RIPK2O43353 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RIPK2O43353 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RIPK2O43353 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RIPK2O43353 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.81■□□□□ 0.6
RIPK2O43353 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.81■□□□□ 0.6
RIPK2O43353 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.81■□□□□ 0.6
RIPK2O43353 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.81■□□□□ 0.6
RIPK2O43353 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.81■□□□□ 0.6
RIPK2O43353 AL137784.2-201ENST00000607332 1000 ntBASIC18.81■□□□□ 0.6
RIPK2O43353 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RIPK2O43353 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.81■□□□□ 0.6
RIPK2O43353 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.81■□□□□ 0.6
RIPK2O43353 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIPK2O43353 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RIPK2O43353 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RIPK2O43353 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RIPK2O43353 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RIPK2O43353 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RIPK2O43353 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RIPK2O43353 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.8■□□□□ 0.6
RIPK2O43353 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.8■□□□□ 0.6
RIPK2O43353 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.8■□□□□ 0.6
RIPK2O43353 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RIPK2O43353 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.8■□□□□ 0.6
RIPK2O43353 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.8■□□□□ 0.6
RIPK2O43353 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.8■□□□□ 0.6
RIPK2O43353 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RIPK2O43353 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIPK2O43353 PP12613-201ENST00000424958 2230 ntBASIC18.8■□□□□ 0.6
RIPK2O43353 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms