Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.6■□□□□ 0.41
CASQ2O14958 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CASQ2O14958 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CASQ2O14958 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.6■□□□□ 0.41
CASQ2O14958 TERF1P5-201ENST00000477545 1207 ntBASIC17.6■□□□□ 0.41
CASQ2O14958 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.6■□□□□ 0.41
CASQ2O14958 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CASQ2O14958 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CASQ2O14958 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASQ2O14958 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASQ2O14958 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CASQ2O14958 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASQ2O14958 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.59■□□□□ 0.41
CASQ2O14958 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASQ2O14958 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASQ2O14958 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASQ2O14958 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.59■□□□□ 0.41
CASQ2O14958 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.59■□□□□ 0.41
CASQ2O14958 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASQ2O14958 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CASQ2O14958 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.59■□□□□ 0.41
CASQ2O14958 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CASQ2O14958 KRT8P8-201ENST00000434750 1448 ntBASIC17.59■□□□□ 0.41
CASQ2O14958 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.59■□□□□ 0.41
CASQ2O14958 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASQ2O14958 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.59■□□□□ 0.41
CASQ2O14958 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.59■□□□□ 0.41
CASQ2O14958 AF213884.3-201ENST00000563833 479 ntBASIC17.59■□□□□ 0.41
CASQ2O14958 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.59■□□□□ 0.41
CASQ2O14958 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASQ2O14958 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CASQ2O14958 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.59■□□□□ 0.41
CASQ2O14958 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.59■□□□□ 0.41
CASQ2O14958 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASQ2O14958 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CASQ2O14958 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.58■□□□□ 0.41
CASQ2O14958 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CASQ2O14958 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CASQ2O14958 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.58■□□□□ 0.41
CASQ2O14958 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.58■□□□□ 0.41
CASQ2O14958 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.58■□□□□ 0.41
CASQ2O14958 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.58■□□□□ 0.41
CASQ2O14958 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CASQ2O14958 LINC02228-203ENST00000641970 1355 ntBASIC17.58■□□□□ 0.4
CASQ2O14958 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 AC027612.3-201ENST00000413684 1047 ntBASIC17.58■□□□□ 0.4
CASQ2O14958 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.58■□□□□ 0.4
CASQ2O14958 REXO1L9P-201ENST00000604264 2108 ntBASIC17.58■□□□□ 0.4
CASQ2O14958 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.58■□□□□ 0.4
CASQ2O14958 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CASQ2O14958 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CASQ2O14958 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CASQ2O14958 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.58■□□□□ 0.4
CASQ2O14958 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASQ2O14958 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASQ2O14958 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CASQ2O14958 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.57■□□□□ 0.4
CASQ2O14958 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASQ2O14958 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CASQ2O14958 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASQ2O14958 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASQ2O14958 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CASQ2O14958 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CASQ2O14958 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CASQ2O14958 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASQ2O14958 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CASQ2O14958 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.57■□□□□ 0.4
CASQ2O14958 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.57■□□□□ 0.4
CASQ2O14958 AC007322.4-201ENST00000509611 723 ntBASIC17.57■□□□□ 0.4
CASQ2O14958 C2orf69P4-201ENST00000565394 541 ntBASIC17.57■□□□□ 0.4
CASQ2O14958 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.57■□□□□ 0.4
CASQ2O14958 UBE2DNL-204ENST00000602536 740 ntBASIC17.57■□□□□ 0.4
CASQ2O14958 MYCNOS-205ENST00000641950 531 ntBASIC17.57■□□□□ 0.4
CASQ2O14958 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms