Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 AC120498.8-201ENST00000614275 531 ntBASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 SIRPAP1-201ENST00000448467 1770 ntBASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV18A0A075B6X5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 AC009053.2-201ENST00000563701 2365 ntBASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 MIPEPP3-201ENST00000412105 444 ntBASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV18A0A075B6X5 AC099398.1-201ENST00000567919 2776 ntBASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 CROCCP1-201ENST00000426910 5675 ntBASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 AC012317.2-201ENST00000623305 2251 ntBASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 AL050303.2-201ENST00000619798 666 ntBASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 HLA-A-209ENST00000638375 975 ntBASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV18A0A075B6X5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms