Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.651e-5■■■□□ 18
XRN2Q9H0D6 RPL23-206ENST00000479035 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.655e-8■■■□□ 18
XRN2Q9H0D6 C15orf40-206ENST00000510873 287 ntTSL 210.98□□□□□ -0.651e-5■■■□□ 18
XRN2Q9H0D6 DPH7-205ENST00000470855 479 ntTSL 510.94□□□□□ -0.661e-5■■■□□ 18
XRN2Q9H0D6 DMKN-267ENST00000602679 557 ntAPPRIS ALT2 TSL 310.93□□□□□ -0.661e-5■■■□□ 18
XRN2Q9H0D6 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.661e-5■■■□□ 18
XRN2Q9H0D6 WDR73-214ENST00000560088 526 ntTSL 310.91□□□□□ -0.661e-5■■■□□ 18
XRN2Q9H0D6 ADD3-203ENST00000360162 3114 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.665e-8■■■□□ 18
XRN2Q9H0D6 DMKN-231ENST00000470746 370 ntTSL 210.88□□□□□ -0.671e-5■■■□□ 18
XRN2Q9H0D6 DMKN-232ENST00000470857 560 ntTSL 410.88□□□□□ -0.671e-5■■■□□ 18
XRN2Q9H0D6 ADD3-201ENST00000277900 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.675e-8■■■□□ 18
XRN2Q9H0D6 IST1-224ENST00000566536 612 ntTSL 210.79□□□□□ -0.681e-5■■■□□ 18
XRN2Q9H0D6 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.691e-5■■■□□ 18
XRN2Q9H0D6 CDHR2-203ENST00000506348 4005 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71e-5■■■□□ 18
XRN2Q9H0D6 WDR45B-204ENST00000571835 869 ntTSL 510.62□□□□□ -0.711e-5■■■□□ 18
XRN2Q9H0D6 DLST-205ENST00000554806 837 ntTSL 1 (best)10.61□□□□□ -0.715e-8■■■□□ 18
XRN2Q9H0D6 DLST-207ENST00000555089 1078 ntTSL 1 (best)10.59□□□□□ -0.715e-8■■■□□ 18
XRN2Q9H0D6 MTHFD1-210ENST00000555252 2053 ntTSL 1 (best)10.56□□□□□ -0.725e-8■■■□□ 18
XRN2Q9H0D6 AL157392.3-233ENST00000612296 841 ntTSL 510.52□□□□□ -0.731e-5■■■□□ 18
XRN2Q9H0D6 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.751e-5■■■□□ 18
XRN2Q9H0D6 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.761e-5■■■□□ 18
XRN2Q9H0D6 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.761e-5■■■□□ 18
XRN2Q9H0D6 KIAA1671-205ENST00000494730 6082 ntTSL 1 (best)10.26□□□□□ -0.771e-5■■■□□ 18
XRN2Q9H0D6 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.772e-10■■■□□ 18
XRN2Q9H0D6 KANK1-209ENST00000489369 7193 ntTSL 510.2□□□□□ -0.782e-10■■■□□ 18
XRN2Q9H0D6 IST1-204ENST00000424485 521 ntTSL 410.14□□□□□ -0.791e-5■■■□□ 18
XRN2Q9H0D6 RELA-212ENST00000527874 578 ntTSL 410.05□□□□□ -0.82e-18■■■□□ 18
XRN2Q9H0D6 NKIRAS2-203ENST00000393879 4213 ntTSL 1 (best)10.02□□□□□ -0.811e-5■■■□□ 18
XRN2Q9H0D6 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.822e-10■■■□□ 18
XRN2Q9H0D6 RNF19A-209ENST00000522182 544 ntTSL 49.92□□□□□ -0.821e-5■■■□□ 18
XRN2Q9H0D6 RNF19A-210ENST00000522369 612 ntTSL 49.92□□□□□ -0.821e-5■■■□□ 18
XRN2Q9H0D6 IST1-212ENST00000538104 531 ntTSL 49.91□□□□□ -0.821e-5■■■□□ 18
XRN2Q9H0D6 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC9.91□□□□□ -0.821e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.821e-5■■■□□ 18
XRN2Q9H0D6 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.831e-5■■■□□ 18
XRN2Q9H0D6 WDR73-216ENST00000560252 1180 ntTSL 29.88□□□□□ -0.831e-5■■■□□ 18
XRN2Q9H0D6 CDK17-211ENST00000552496 583 ntTSL 39.83□□□□□ -0.841e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-217ENST00000613937 923 ntTSL 59.76□□□□□ -0.851e-5■■■□□ 18
XRN2Q9H0D6 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC9.73□□□□□ -0.851e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC9.71□□□□□ -0.851e-5■■■□□ 18
XRN2Q9H0D6 DMKN-263ENST00000595571 351 ntTSL 39.7□□□□□ -0.861e-5■■■□□ 18
XRN2Q9H0D6 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.861e-5■■■□□ 18
XRN2Q9H0D6 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.861e-5■■■□□ 18
XRN2Q9H0D6 WDR73-221ENST00000561447 560 ntTSL 49.61□□□□□ -0.871e-5■■■□□ 18
XRN2Q9H0D6 AC060780.1-203ENST00000634503 2406 ntTSL 3 BASIC9.6□□□□□ -0.871e-5■■■□□ 18
XRN2Q9H0D6 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.881e-5■■■□□ 18
XRN2Q9H0D6 RPL23-210ENST00000584583 429 ntTSL 29.56□□□□□ -0.885e-8■■■□□ 18
XRN2Q9H0D6 DLST-216ENST00000626051 252 ntTSL 5 BASIC9.55□□□□□ -0.885e-8■■■□□ 18
XRN2Q9H0D6 IST1-220ENST00000541918 908 ntTSL 59.53□□□□□ -0.881e-5■■■□□ 18
XRN2Q9H0D6 G3BP2-214ENST00000509561 559 ntTSL 49.44□□□□□ -0.91e-5■■■□□ 18
XRN2Q9H0D6 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.92e-10■■■□□ 18
XRN2Q9H0D6 FOXN3-208ENST00000555034 505 ntTSL 39.35□□□□□ -0.911e-5■■■□□ 18
XRN2Q9H0D6 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC9.31□□□□□ -0.925e-8■■■□□ 18
XRN2Q9H0D6 GATS-208ENST00000445230 451 ntTSL 39.29□□□□□ -0.921e-5■■■□□ 18
XRN2Q9H0D6 RNF19A-213ENST00000523481 547 ntTSL 49.24□□□□□ -0.931e-5■■■□□ 18
XRN2Q9H0D6 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.935e-8■■■□□ 18
XRN2Q9H0D6 CPE-205ENST00000513982 564 ntTSL 49.22□□□□□ -0.935e-8■■■□□ 18
XRN2Q9H0D6 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.945e-8■■■□□ 18
XRN2Q9H0D6 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.961e-5■■■□□ 18
XRN2Q9H0D6 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.961e-5■■■□□ 18
XRN2Q9H0D6 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.981e-5■■■□□ 18
XRN2Q9H0D6 AKAP8L-217ENST00000600065 679 ntTSL 38.88□□□□□ -0.991e-5■■■□□ 18
XRN2Q9H0D6 TECR-208ENST00000596164 245 ntTSL 38.81□□□□□ -11e-5■■■□□ 18
XRN2Q9H0D6 C15orf40-207ENST00000512638 505 ntTSL 38.78□□□□□ -11e-5■■■□□ 18
XRN2Q9H0D6 SREK1-215ENST00000524111 4074 ntTSL 58.69□□□□□ -1.021e-5■■■□□ 18
XRN2Q9H0D6 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.021e-5■■■□□ 18
XRN2Q9H0D6 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.65□□□□□ -1.031e-5■■■□□ 18
XRN2Q9H0D6 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.031e-5■■■□□ 18
XRN2Q9H0D6 RPL23-211ENST00000584912 2779 ntTSL 1 (best)8.57□□□□□ -1.045e-8■■■□□ 18
XRN2Q9H0D6 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.041e-5■■■□□ 18
XRN2Q9H0D6 U3.18-201ENST00000390880 216 ntBASIC8.53□□□□□ -1.041e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.071e-5■■■□□ 18
XRN2Q9H0D6 IST1-217ENST00000540296 476 ntTSL 48.37□□□□□ -1.071e-5■■■□□ 18
XRN2Q9H0D6 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.25□□□□□ -1.091e-5■■■□□ 18
XRN2Q9H0D6 C15orf40-204ENST00000506912 1077 ntTSL 1 (best)8.21□□□□□ -1.11e-5■■■□□ 18
XRN2Q9H0D6 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.14□□□□□ -1.111e-5■■■□□ 18
XRN2Q9H0D6 CDK5RAP2-209ENST00000473282 5956 ntTSL 1 (best)8.1□□□□□ -1.111e-5■■■□□ 18
XRN2Q9H0D6 DMKN-260ENST00000498269 402 ntTSL 38.09□□□□□ -1.111e-5■■■□□ 18
XRN2Q9H0D6 TCEA3-202ENST00000374602 575 ntTSL 37.99□□□□□ -1.135e-8■■■□□ 18
XRN2Q9H0D6 TRIM4-204ENST00000447480 639 ntTSL 37.97□□□□□ -1.131e-5■■■□□ 18
XRN2Q9H0D6 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.161e-5■■■□□ 18
XRN2Q9H0D6 FOXN3-205ENST00000553904 337 ntTSL 37.81□□□□□ -1.161e-5■■■□□ 18
XRN2Q9H0D6 TRAF4-213ENST00000578917 484 ntTSL 47.68□□□□□ -1.181e-5■■■□□ 18
XRN2Q9H0D6 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.181e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-214ENST00000612284 794 ntTSL 57.61□□□□□ -1.191e-5■■■□□ 18
XRN2Q9H0D6 NCL-208ENST00000466274 671 ntTSL 27.56□□□□□ -1.21e-5■■■□□ 18
XRN2Q9H0D6 EPN1-206ENST00000589704 250 ntTSL 57.5□□□□□ -1.211e-5■■■□□ 18
XRN2Q9H0D6 NFKBIZ-209ENST00000491281 564 ntTSL 47.44□□□□□ -1.225e-8■■■□□ 18
XRN2Q9H0D6 BRCA1-230ENST00000634433 2534 ntTSL 57.34□□□□□ -1.231e-5■■■□□ 18
XRN2Q9H0D6 ITCH-206ENST00000486883 703 ntTSL 27.14□□□□□ -1.271e-5■■■□□ 18
XRN2Q9H0D6 C15orf40-205ENST00000508990 631 ntTSL 26.69□□□□□ -1.341e-5■■■□□ 18
XRN2Q9H0D6 G3BP2-212ENST00000508510 554 ntTSL 56.65□□□□□ -1.341e-5■■■□□ 18
XRN2Q9H0D6 G3BP2-213ENST00000509100 514 ntTSL 56.6□□□□□ -1.351e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-208ENST00000599639 652 ntTSL 56.35□□□□□ -1.391e-5■■■□□ 18
XRN2Q9H0D6 LRMDA-210ENST00000593817 221 ntTSL 36.25□□□□□ -1.418e-7■■■□□ 18
XRN2Q9H0D6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.441e-5■■■□□ 18
XRN2Q9H0D6 C11orf58-205ENST00000525106 549 ntTSL 25.86□□□□□ -1.471e-5■■■□□ 18
XRN2Q9H0D6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.78□□□□□ -1.481e-5■■■□□ 18
XRN2Q9H0D6 RALGAPA1-209ENST00000554652 4487 ntTSL 25.74□□□□□ -1.495e-8■■■□□ 18
XRN2Q9H0D6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.7□□□□□ -1.55e-8■■■□□ 18
Retrieved 100 of 21,068 protein–RNA pairs in 246 ms